RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 CSPG5O95196 566 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 GNA14O95837 355 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 EFEMP2O95967 443 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 AP3M2P53677 418 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 CAMK1Q14012 370 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 PTPROQ16827 1216 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 CCDC40Q4G0X9 1142 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 TRAPPC11Q7Z392 1133 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 FRMD5Q7Z6J6 570 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 RNF168Q8IYW5 571 aaPredicted RBP16.92■□□□□ 0.3
RBM39-219ENST00000453310 VPS52Q8N1B4 723 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 CXorf38Q8TB03 319 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 ZNF516Q92618 1163 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 GUCD1Q96NT3 240 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 GAS2L1Q99501 681 aaPredicted RBP16.92■□□□□ 0.3
RBM39-219ENST00000453310 HERC2P3Q9BVR0 1158 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 GPR62Q9BZJ7 368 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 METTL14Q9HCE5 456 aaKnown RBP16.92■□□□□ 0.3
RBM39-219ENST00000453310 TLR9Q9NR96 1032 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 STK39Q9UEW8 545 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 ARMCX3Q9UH62 379 aaPredicted RBP16.92■□□□□ 0.3
RBM39-219ENST00000453310 SIX4Q9UIU6 781 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 NUB1Q9Y5A7 615 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 SCN1AP35498 2009 aa16.92■□□□□ 0.3
RBM39-219ENST00000453310 IKBKBO14920 756 aa16.91■□□□□ 0.3
RBM39-219ENST00000453310 SOD2P04179 222 aa16.91■□□□□ 0.3
RBM39-219ENST00000453310 KRT19P08727 400 aa16.91■□□□□ 0.3
RBM39-219ENST00000453310 BRCC3P46736 316 aa16.91■□□□□ 0.3
RBM39-219ENST00000453310 MCCD1P59942 119 aaPredicted RBP16.91■□□□□ 0.3
RBM39-219ENST00000453310 ELAVL2Q12926 359 aaKnown RBP16.91■□□□□ 0.3
RBM39-219ENST00000453310 ADGRE1Q14246 886 aa16.91■□□□□ 0.3
RBM39-219ENST00000453310 ANO6Q4KMQ2 910 aa16.91■□□□□ 0.3
RBM39-219ENST00000453310 DCAF17Q5H9S7 520 aaPredicted RBP16.91■□□□□ 0.3
RBM39-219ENST00000453310 SCARA3Q6AZY7 606 aa16.91■□□□□ 0.3
RBM39-219ENST00000453310 ENOX1Q8TC92 643 aaKnown RBP16.91■□□□□ 0.3
RBM39-219ENST00000453310 MYLIPQ8WY64 445 aa16.91■□□□□ 0.3
RBM39-219ENST00000453310 MRPL38Q96DV4 380 aaKnown RBP16.91■□□□□ 0.3
RBM39-219ENST00000453310 ZNF560Q96MR9 790 aa16.91■□□□□ 0.3
RBM39-219ENST00000453310 CDX2Q99626 313 aaPredicted RBP16.91■□□□□ 0.3
RBM39-219ENST00000453310 TCF25Q9BQ70 676 aa16.91■□□□□ 0.3
RBM39-219ENST00000453310 ZBP1Q9H171 429 aa16.91■□□□□ 0.3
RBM39-219ENST00000453310 AGAP1Q9UPQ3 857 aa16.91■□□□□ 0.3
RBM39-219ENST00000453310 I3L4J1 428 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 TRAPPC3O43617 180 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 C4BPAP04003 597 aaKnown RBP16.9■□□□□ 0.3
RBM39-219ENST00000453310 CTSAP10619 480 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 IRS1P35568 1242 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 AARSP49588 968 aaKnown RBP eCLIP16.9■□□□□ 0.34e-6■□□□□ 9.4
RBM39-219ENST00000453310 TAF6P49848 677 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 MARSP56192 900 aaKnown RBP16.9■□□□□ 0.3
RBM39-219ENST00000453310 LILRA4P59901 499 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 ERVFC1P60507 584 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 RBP5P82980 135 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 PPP3CAQ08209 521 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 BIRC3Q13489 604 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 ZACNQ401N2 412 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 TIGD5Q53EQ6 642 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 FAM171A1Q5VUB5 890 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 TCERG1LQ5VWI1 586 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 TDRD10Q5VZ19 366 aaKnown RBP16.9■□□□□ 0.3
RBM39-219ENST00000453310 TAS1R1Q7RTX1 841 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 TMC7Q7Z402 723 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 LRRC52Q8N7C0 313 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 CNOT6LQ96LI5 555 aaKnown RBP16.9■□□□□ 0.3
RBM39-219ENST00000453310 NAT10Q9H0A0 1025 aaKnown RBP16.9■□□□□ 0.3
RBM39-219ENST00000453310 THAP9Q9H5L6 903 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 MMRN2Q9H8L6 949 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 ENTPD7Q9NQZ7 604 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 LMCD1Q9NZU5 365 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 R3HCC1Q9Y3T6 440 aaKnown RBP16.9■□□□□ 0.3
RBM39-219ENST00000453310 VWA8A3KMH1 1905 aa16.9■□□□□ 0.3
RBM39-219ENST00000453310 FSCN2O14926 492 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 SPTLC1O15269 473 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 PHACTR2O75167 634 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 URODP06132 367 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 POU3F3P20264 500 aaPredicted RBP16.89■□□□□ 0.29
RBM39-219ENST00000453310 IGFBP4P22692 258 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 PAX3P23760 479 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 GTF2H1P32780 548 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 PNPLA4P41247 253 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 GCLMP48507 274 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 BMS1Q14692 1282 aaKnown RBP16.89■□□□□ 0.29
RBM39-219ENST00000453310 USP41Q3LFD5 358 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 SV2CQ496J9 727 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 PLPP4Q5VZY2 271 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 PDE12Q6L8Q7 609 aaKnown RBP16.89■□□□□ 0.29
RBM39-219ENST00000453310 C15orf39Q6ZRI6 1047 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 SV2AQ7L0J3 742 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 IRF2BP1Q8IU81 584 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 SLC35C1Q96A29 364 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 SUSD3Q96L08 255 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 B3GALT6Q96L58 329 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 TMEM8AQ9HCN3 771 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 NGRNQ9NPE2 291 aaKnown RBP16.89■□□□□ 0.29
RBM39-219ENST00000453310 CHST7Q9NS84 486 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 NFE2L3Q9Y4A8 694 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 PCDHGC5Q9Y5F6 944 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 MTCH2Q9Y6C9 303 aa16.89■□□□□ 0.29
RBM39-219ENST00000453310 STX10O60499 249 aa16.88■□□□□ 0.29
RBM39-219ENST00000453310 CST3P01034 146 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms