RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 POU2F2P09086 479 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 SRFP11831 508 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 ATF2P15336 505 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 LRPAP1P30533 357 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 CLCN5P51795 746 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 TCF15Q12870 199 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 MRPL58Q14197 206 aaKnown RBP14.01□□□□□ -0.17
CHD3-206ENST00000452447 SLC39A14Q15043 492 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 ENOX2Q16206 610 aaKnown RBP14.01□□□□□ -0.17
CHD3-206ENST00000452447 PABPC1LQ4VXU2 614 aaKnown RBP14.01□□□□□ -0.17
CHD3-206ENST00000452447 ZC2HC1CQ53FD0 456 aaPredicted RBP14.01□□□□□ -0.17
CHD3-206ENST00000452447 ZBTB41Q5SVQ8 909 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 ADALQ6DHV7 355 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 SIX5Q8N196 739 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 DDX12PQ92771 950 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 FGF13Q92913 245 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 ST6GALNAC4Q9H4F1 302 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 MRPL44Q9H9J2 332 aaKnown RBP14.01□□□□□ -0.17
CHD3-206ENST00000452447 CYP4F11Q9HBI6 524 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 WNT16Q9UBV4 365 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 PCDHB8Q9UN66 801 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 NUMBLQ9Y6R0 609 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 PTPRZ1P23471 2315 aaPredicted RBP14.01□□□□□ -0.17
CHD3-206ENST00000452447 MYO15AQ9UKN7 3530 aa14.01□□□□□ -0.17
CHD3-206ENST00000452447 USP34Q70CQ2 3546 aa14□□□□□ -0.17
CHD3-206ENST00000452447 ANHXE9PGG2 379 aa14□□□□□ -0.17
CHD3-206ENST00000452447 STK25O00506 426 aa14□□□□□ -0.17
CHD3-206ENST00000452447 FAM189A1O60320 539 aa14□□□□□ -0.17
CHD3-206ENST00000452447 RFX1P22670 979 aa14□□□□□ -0.17
CHD3-206ENST00000452447 STAT6P42226 847 aa14□□□□□ -0.17
CHD3-206ENST00000452447 MRE11P49959 708 aa14□□□□□ -0.17
CHD3-206ENST00000452447 YWHAHQ04917 246 aaPredicted RBP14□□□□□ -0.17
CHD3-206ENST00000452447 HTR4Q13639 388 aa14□□□□□ -0.17
CHD3-206ENST00000452447 STK38Q15208 465 aa14□□□□□ -0.17
CHD3-206ENST00000452447 ZBTB6Q15916 424 aa14□□□□□ -0.17
CHD3-206ENST00000452447 TPGS2Q68CL5 300 aa14□□□□□ -0.17
CHD3-206ENST00000452447 SLC39A4Q6P5W5 647 aa14□□□□□ -0.17
CHD3-206ENST00000452447 ZNF720Q7Z2F6 126 aa14□□□□□ -0.17
CHD3-206ENST00000452447 USP37Q86T82 979 aa14□□□□□ -0.17
CHD3-206ENST00000452447 SFR1Q86XK3 245 aa14□□□□□ -0.17
CHD3-206ENST00000452447 TMEM105Q8N8V8 129 aa14□□□□□ -0.17
CHD3-206ENST00000452447 ST13P5Q8NFI4 369 aaPredicted RBP14□□□□□ -0.17
CHD3-206ENST00000452447 BEST2Q8NFU1 509 aa14□□□□□ -0.17
CHD3-206ENST00000452447 PANK2Q9BZ23 570 aa14□□□□□ -0.17
CHD3-206ENST00000452447 HCFC1R1Q9NWW0 138 aa14□□□□□ -0.17
CHD3-206ENST00000452447 DNMT3BQ9UBC3 853 aaKnown RBP14□□□□□ -0.17
CHD3-206ENST00000452447 SEL1LQ9UBV2 794 aa14□□□□□ -0.17
CHD3-206ENST00000452447 CPSF3Q9UKF6 684 aaKnown RBP14□□□□□ -0.17
CHD3-206ENST00000452447 KCNH3Q9ULD8 1083 aa14□□□□□ -0.17
CHD3-206ENST00000452447 MRPS23Q9Y3D9 190 aaKnown RBP14□□□□□ -0.17
CHD3-206ENST00000452447 MYH15Q9Y2K3 1946 aa14□□□□□ -0.17
CHD3-206ENST00000452447 ANK1P16157 1881 aa14□□□□□ -0.17
CHD3-206ENST00000452447 ARHGEF37A1IGU5 675 aa14□□□□□ -0.17
CHD3-206ENST00000452447 MYMKA6NI61 221 aa14□□□□□ -0.17
CHD3-206ENST00000452447 M0QZQ0 153 aa14□□□□□ -0.17
CHD3-206ENST00000452447 GALR2O43603 387 aaPredicted RBP14□□□□□ -0.17
CHD3-206ENST00000452447 TBC1D4O60343 1298 aa14□□□□□ -0.17
CHD3-206ENST00000452447 HSP90AA1P07900 732 aaKnown RBP14□□□□□ -0.17
CHD3-206ENST00000452447 CPB1P15086 417 aa14□□□□□ -0.17
CHD3-206ENST00000452447 GAP43P17677 238 aa14□□□□□ -0.17
CHD3-206ENST00000452447 ACOT2P49753 483 aa14□□□□□ -0.17
CHD3-206ENST00000452447 DSTYKQ6XUX3 929 aa14□□□□□ -0.17
CHD3-206ENST00000452447 MTSS1LQ765P7 747 aa14□□□□□ -0.17
CHD3-206ENST00000452447 TCEAL8Q8IYN2 117 aa14□□□□□ -0.17
CHD3-206ENST00000452447 ITFG1Q8TB96 612 aa14□□□□□ -0.17
CHD3-206ENST00000452447 HVCN1Q96D96 273 aa14□□□□□ -0.17
CHD3-206ENST00000452447 AGO2Q9UKV8 859 aaKnown RBP14□□□□□ -0.17
CHD3-206ENST00000452447 EXOC7Q9UPT5 735 aa14□□□□□ -0.17
CHD3-206ENST00000452447 MORC2Q9Y6X9 1032 aaPredicted RBP14□□□□□ -0.17
CHD3-206ENST00000452447 RIF1Q5UIP0 2472 aaKnown RBP14□□□□□ -0.17
CHD3-206ENST00000452447 DMDP11532 3685 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 VPS13AQ96RL7 3174 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 SCN1AP35498 2009 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 ZFHX2Q9C0A1 2572 aaPredicted RBP13.99□□□□□ -0.17
CHD3-206ENST00000452447 ANKRD63C9JTQ0 380 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 ADRB2P07550 413 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 IDEP14735 1019 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 PTPN2P17706 415 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 AOC1P19801 751 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 GUCY2FP51841 1108 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 ADCY1Q08828 1119 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 POSTNQ15063 836 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 SPATA1Q5VX52 437 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 JADE1Q6IE81 842 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 PARM1Q6UWI2 310 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 ELMOD1Q8N336 334 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 TMEM130Q8N3G9 435 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 POMGNT1Q8WZA1 660 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 ATOH1Q92858 354 aaPredicted RBP13.99□□□□□ -0.17
CHD3-206ENST00000452447 FGF14Q92915 247 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 SNX21Q969T3 373 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 ZNF396Q96N95 335 aaPredicted RBP13.99□□□□□ -0.17
CHD3-206ENST00000452447 RTP3Q9BQQ7 232 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 OXCT2Q9BYC2 517 aaPredicted RBP13.99□□□□□ -0.17
CHD3-206ENST00000452447 TBC1D7Q9P0N9 293 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 AFF4Q9UHB7 1163 aaKnown RBP13.99□□□□□ -0.17
CHD3-206ENST00000452447 CA14Q9ULX7 337 aa13.99□□□□□ -0.17
CHD3-206ENST00000452447 TIMM13Q9Y5L4 95 aaPredicted RBP13.99□□□□□ -0.17
CHD3-206ENST00000452447 TISP43B9A030 160 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 H0Y858 1186 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms