RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 RARAP10276 462 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 ZNF844Q08AG5 666 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 MCOLN2Q8IZK6 566 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 FBXO25Q8TCJ0 367 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 COPS5Q92905 334 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 FMO2Q99518 471 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 C11orf70Q9BRQ4 267 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 FAM114A2Q9NRY5 505 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 NRBP2Q9NSY0 501 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 UVRAGQ9P2Y5 699 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 PCDHB2Q9Y5E7 798 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 PCDHA3Q9Y5H8 950 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 PHF2O75151 1096 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 RPS6KA5O75582 802 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 CST3P01034 146 aaPredicted RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 ACO1P21399 889 aaKnown RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 EDNRBP24530 442 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 RPS6KA3P51812 740 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 CUL2Q13617 745 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 UBAP2Q5T6F2 1119 aaKnown RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 CCDC137Q6PK04 289 aaKnown RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 SLC13A5Q86YT5 568 aaPredicted RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 EIF1ADQ8N9N8 165 aaKnown RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 C1orf54Q8WWF1 131 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 SEPT1Q8WYJ6 367 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 ATP6V1G3Q96LB4 118 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 JPH2Q9BR39 696 aaPredicted RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 RAB17Q9H0T7 212 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 SPATS2LQ9NUQ6 558 aaKnown RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 PTPRFP10586 1907 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 MROH7Q68CQ1 1323 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 CNTNAP2Q9UHC6 1331 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 MYO1FO00160 1098 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 KIAA0391O15091 583 aaKnown RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 ADCY3O60266 1144 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 CNMDO75829 334 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 NR1D1P20393 614 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 PTGIRP43119 386 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 OSTNP61366 133 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 NOP14P78316 857 aaKnown RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 SNX1Q13596 522 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 NEDD9Q14511 834 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 ZNF394Q53GI3 561 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 ENOSF1Q7L5Y1 443 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 CD302Q8IX05 232 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 FBXO16Q8IX29 292 aaPredicted RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 CCDC105Q8IYK2 499 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 RNF149Q8NC42 400 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.87□□□□□ -0.351e-7■■■■■ 89.7
COL27A1-202ENST00000451716 TACO1Q9BSH4 297 aaKnown RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 ZDHHC18Q9NUE0 388 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 DCDC2CA8MYV0 355 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 ZC3H11AO75152 810 aaKnown RBP eCLIP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 MYZAPP0CAP1 466 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 CTNNA2P26232 953 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 NSFP46459 744 aaKnown RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 RPL21P46778 160 aaKnown RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 SLFN12LQ6IEE8 588 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 METTL7BQ6UX53 244 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 TMEM130Q8N3G9 435 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 BCAS4Q8TDM0 211 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 N4BP2L2Q92802 583 aaPredicted RBP12.87□□□□□ -0.35
COL27A1-202ENST00000451716 HERPUD2Q9BSE4 406 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 AZI2Q9H6S1 392 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 TMBIM4Q9HC24 238 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 RNF181Q9P0P0 153 aa12.87□□□□□ -0.35
COL27A1-202ENST00000451716 ADGRA2Q96PE1 1338 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 GOLGA6L10A6NI86 522 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 CD58P19256 250 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 GNA15P30679 374 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 GRIK3Q13003 919 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 NCOA4Q13772 614 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 SIX1Q15475 284 aaPredicted RBP12.86□□□□□ -0.35
COL27A1-202ENST00000451716 FAM160B1Q5W0V3 765 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 TADA2BQ86TJ2 420 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 EFCAB13Q8IY85 973 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 UHMK1Q8TAS1 419 aaKnown RBP12.86□□□□□ -0.35
COL27A1-202ENST00000451716 ATG4AQ8WYN0 398 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 FGD4Q96M96 766 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 FAM118BQ9BPY3 351 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 MTMR12Q9C0I1 747 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 ADARB2Q9NS39 739 aaKnown RBP12.86□□□□□ -0.35
COL27A1-202ENST00000451716 NOP56O00567 594 aaKnown RBP12.86□□□□□ -0.35
COL27A1-202ENST00000451716 SOCS7O14512 581 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 EIF3HO15372 352 aaKnown RBP eCLIP12.86□□□□□ -0.352e-15■■■□□ 15.1
COL27A1-202ENST00000451716 MAFO75444 373 aaPredicted RBP12.86□□□□□ -0.35
COL27A1-202ENST00000451716 PIGRP01833 764 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 CHRNA3P32297 505 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 GJC1P36383 396 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 CCT5P48643 541 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 DHX34Q14147 1143 aaKnown RBP12.86□□□□□ -0.35
COL27A1-202ENST00000451716 ZDHHC24Q6UX98 284 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 RBBP8NLQ8NC74 664 aaPredicted RBP12.86□□□□□ -0.35
COL27A1-202ENST00000451716 CGRRF1Q99675 332 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 RBPJLQ9UBG7 517 aa12.86□□□□□ -0.35
COL27A1-202ENST00000451716 MCM3APO60318 1980 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 A0A0G2JLL6 359 aaPredicted RBP12.85□□□□□ -0.35
COL27A1-202ENST00000451716 THAP12O43422 761 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 MSCO60682 206 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 CSDE1O75534 798 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms