RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 TMEM120BA0PK00 339 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 DIAPH2O60879 1101 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 SMIM24O75264 130 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 FAM107AO95990 144 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 PDGFRAP16234 1089 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 ARPP19P56211 112 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 POLE2P56282 527 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 TAP1Q03518 808 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 MEA1Q16626 185 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 SGSM1Q2NKQ1 1148 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 ANGEL2Q5VTE6 544 aaKnown RBP7.55□□□□□ -1.2
BEST1-202ENST00000449131 HEATR6Q6AI08 1181 aaKnown RBP7.55□□□□□ -1.2
BEST1-202ENST00000449131 SYDE1Q6ZW31 735 aaPredicted RBP7.55□□□□□ -1.2
BEST1-202ENST00000449131 LRRC71Q8N4P6 559 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 FBXO25Q8TCJ0 367 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 ATG4AQ8WYN0 398 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 FAM163AQ96GL9 167 aaPredicted RBP7.55□□□□□ -1.2
BEST1-202ENST00000449131 MMP19Q99542 508 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 KLF6Q99612 283 aaPredicted RBP7.55□□□□□ -1.2
BEST1-202ENST00000449131 SLC40A1Q9NP59 571 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 MYOZ2Q9NPC6 264 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 FGFR1OP2Q9NVK5 253 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 AIPL1Q9NZN9 384 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 IPO11Q9UI26 975 aaKnown RBP7.55□□□□□ -1.2
BEST1-202ENST00000449131 INPP5FQ9Y2H2 1132 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 TMX2Q9Y320 296 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 USH1CQ9Y6N9 552 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 ENO4A6NNW6 628 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 NFIBO00712 420 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 MAFGO15525 162 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 GRAP2O75791 330 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 ATP5HO75947 161 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 HSPA4LO95757 839 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 GTF2H1P32780 548 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 FUT2Q10981 343 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 ACAD10Q6JQN1 1059 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 ZNF507Q8TCN5 953 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 MTMR9Q96QG7 549 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 SUFUQ9UMX1 484 aa7.55□□□□□ -1.2
BEST1-202ENST00000449131 SPDYE16A6NNV3 312 aaPredicted RBP7.54□□□□□ -1.2
BEST1-202ENST00000449131 C19orf81C9J6K1 198 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 ZBTB39O15060 712 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 EXTL3O43909 919 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 CAND2O75155 1236 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 SKIP12755 728 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 MAGEA4P43358 317 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 NPTX2P47972 431 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 KIF22Q14807 665 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 SPDYE2Q495Y8 402 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 GPAT2Q6NUI2 795 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 IRF2BP1Q8IU81 584 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 NUDCD3Q8IVD9 361 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 ACTRT1Q8TDG2 376 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 TAS1R2Q8TE23 839 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 RNF139Q8WU17 664 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 SLC35C1Q96A29 364 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 NUDCD1Q96RS6 583 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 PABPC3Q9H361 631 aaKnown RBP7.54□□□□□ -1.2
BEST1-202ENST00000449131 TRAF3IP3Q9Y228 551 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 ARL2BPQ9Y2Y0 163 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 PDE4DIPQ5VU43 2346 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 SPECC1L-ADORA2AF8WAN1 911 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 EML1O00423 815 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 DPEP1P16444 411 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 RHBDL3P58872 404 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 ACTR2P61160 394 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 CDR2Q01850 454 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 SMTNL2Q2TAL5 461 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 APOBEC3HQ6NTF7 200 aaKnown RBP7.54□□□□□ -1.2
BEST1-202ENST00000449131 C4orf50Q6ZRC1 276 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 ABI1Q8IZP0 508 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 ACSF2Q96CM8 615 aaPredicted RBP7.54□□□□□ -1.2
BEST1-202ENST00000449131 SPDL1Q96EA4 605 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 Q9H521 79 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 ELP3Q9H9T3 547 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 KCNQ5Q9NR82 932 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 OLFML3Q9NRN5 406 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 SIK3Q9Y2K2 1263 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 USP15Q9Y4E8 981 aaPredicted RBP7.54□□□□□ -1.2
BEST1-202ENST00000449131 SNX9Q9Y5X1 595 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 MAP3K7O43318 606 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 CST8O60676 142 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 APRTP07741 180 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 MYL3P08590 195 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 CYP11B1P15538 503 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 SNRPFP62306 86 aaKnown RBP7.54□□□□□ -1.2
BEST1-202ENST00000449131 MXD4Q14582 209 aaPredicted RBP7.54□□□□□ -1.2
BEST1-202ENST00000449131 TTMPQ5BVD1 217 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 JADE1Q6IE81 842 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 AADACL2Q6P093 401 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 KDM7AQ6ZMT4 941 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.54□□□□□ -1.2
BEST1-202ENST00000449131 RYBPQ8N488 228 aaPredicted RBP7.54□□□□□ -1.2
BEST1-202ENST00000449131 GMCL1P1Q8NEA9 526 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 GSDMBQ8TAX9 411 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 FEZF2Q8TBJ5 459 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 EPS8L3Q8TE67 593 aaKnown RBP7.54□□□□□ -1.2
BEST1-202ENST00000449131 RAPGEF5Q92565 580 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 PPWD1Q96BP3 646 aaKnown RBP7.54□□□□□ -1.2
BEST1-202ENST00000449131 GRAMD1AQ96CP6 724 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms