RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 PDIA5Q14554 519 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 MAP7D3Q8IWC1 876 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 KIAA1524Q8TCG1 905 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 NDOR1Q9UHB4 597 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 USTQ9Y2C2 406 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 RIPK3Q9Y572 518 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 SYNRGQ9UMZ2 1314 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 TOMM20Q15388 145 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 SHHQ15465 462 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 DEFB119Q8N690 84 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 IL22RA1Q8N6P7 574 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 ARMC5Q96C12 935 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 POLD4Q9HCU8 107 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 ALKBH4Q9NXW9 302 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 LRRC37A3O60309 1634 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 COL22A1Q8NFW1 1626 aaPredicted RBP5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 CSDE1O75534 798 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 ID4P47928 161 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZNF165P49910 485 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 FKBP3Q00688 224 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 LAMTOR4Q0VGL1 99 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 COL9A3Q14050 684 aaPredicted RBP5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 IGDCC4Q8TDY8 1250 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 HMGB4Q8WW32 186 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 TOX2Q96NM4 488 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 CDX2Q99626 313 aaPredicted RBP5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 STRADBQ9C0K7 418 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 DNAJC11Q9NVH1 559 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 DZANK1Q9NVP4 752 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 KLHL3Q9UH77 587 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 RASAL2Q9UJF2 1139 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 PCDHB2Q9Y5E7 798 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 NFASCO94856 1347 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 SCNN1GP51170 649 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 SRSF11Q05519 484 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 EDRF1Q3B7T1 1238 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZNF852Q6ZMS4 543 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 RPAINQ86UA6 219 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 FBXO32Q969P5 355 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 CGNQ9P2M7 1197 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 POLR2AP24928 1970 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 FGF19O95750 216 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 AMD1P17707 334 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 RPIAP49247 311 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 C4orf19Q8IY42 314 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 MS4A4AQ96JQ5 239 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 UROC1Q96N76 676 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 IKBKGQ9Y6K9 419 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 TCRBV5S4A2TA0A5A2 114 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 ATP2A1O14983 1001 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 OGTO15294 1046 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 TOM1L1O75674 476 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 ATP5BP06576 529 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 FGFR4P22455 802 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 PAX3P23760 479 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 ARL4AP40617 200 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZNF394Q53GI3 561 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 PDE12Q6L8Q7 609 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 FAM173BQ6P4H8 233 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 SERPINA13PQ6UXR4 307 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 FAM43BQ6ZT52 329 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 TPRG1Q6ZUI0 275 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 PRPF39Q86UA1 669 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 MLKLQ8NB16 471 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 KIFC3Q9BVG8 833 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 UNC45AQ9H3U1 944 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 NAGPAQ9UK23 515 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 LTN1O94822 1766 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 CRYBG1Q9Y4K1 1723 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 GOLGA6L10A0A0M3HER8 536 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 SPATA31C2B4DYI2 1134 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 ADH1CP00326 375 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 CHGBP05060 677 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 PLS3P13797 630 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 CDC27P30260 824 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 WASHC5Q12768 1159 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 MTHFD1LQ6UB35 978 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 STOX1Q6ZVD7 989 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 B3GALNT2Q8NCR0 500 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 GIPC2Q8TF65 315 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 PTPN18Q99952 460 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 PRPSAP1Q14558 356 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 HSDL1Q3SXM5 330 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 KIAA1211LQ6NV74 962 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 MPZL3Q6UWV2 235 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 SREK1Q8WXA9 508 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 CSRNP2Q9H175 543 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 TMEM161AQ9NX61 479 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 SMPD4Q9NXE4 827 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 CTTNBP2NLQ9P2B4 639 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 APOBEC2Q9Y235 224 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 LUC7L2Q9Y383 392 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 GOLGA8SH3BPF8 625 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 PDGFRBP09619 1106 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 PPARGP37231 505 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 CDK17Q00537 523 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 PPP1R21Q6ZMI0 780 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 HERC6Q8IVU3 1022 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 TMEM192Q8IY95 271 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms