RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 CCDC127Q96BQ5 260 aa12.9□□□□□ -0.34
RFC4-208ENST00000447345 GSDMAQ96QA5 445 aa12.9□□□□□ -0.34
RFC4-208ENST00000447345 MTMR12Q9C0I1 747 aa12.9□□□□□ -0.34
RFC4-208ENST00000447345 CLEC1BQ9P126 229 aa12.9□□□□□ -0.34
RFC4-208ENST00000447345 CGNQ9P2M7 1197 aaKnown RBP12.9□□□□□ -0.34
RFC4-208ENST00000447345 MAN1B1Q9UKM7 699 aa12.9□□□□□ -0.34
RFC4-208ENST00000447345 SSX2IPQ9Y2D8 614 aa12.9□□□□□ -0.34
RFC4-208ENST00000447345 IRAK3Q9Y616 596 aa12.9□□□□□ -0.34
RFC4-208ENST00000447345 DENND4AQ7Z401 1863 aa12.9□□□□□ -0.34
RFC4-208ENST00000447345 C5orf42Q9H799 3197 aa12.9□□□□□ -0.34
RFC4-208ENST00000447345 SPTBN5Q9NRC6 3674 aaKnown RBP12.9□□□□□ -0.35
RFC4-208ENST00000447345 PDXKO00764 312 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 CALUO43852 315 aaPredicted RBP12.89□□□□□ -0.35
RFC4-208ENST00000447345 LILRB3O75022 631 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 ITGB3P05106 788 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 ADH1AP07327 375 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 KRT19P08727 400 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 SRGAP2BP0DMP2 458 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 FGFR3P22607 806 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 POLR2BP30876 1174 aaKnown RBP12.89□□□□□ -0.35
RFC4-208ENST00000447345 PRCPP42785 496 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 SNRPFP62306 86 aaKnown RBP12.89□□□□□ -0.35
RFC4-208ENST00000447345 MRPS5P82675 430 aaKnown RBP12.89□□□□□ -0.35
RFC4-208ENST00000447345 CYP24A1Q07973 514 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 DSTYKQ6XUX3 929 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 PALB2Q86YC2 1186 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 C12orf56Q8IXR9 622 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 OR5B17Q8NGF7 314 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 LNX1Q8TBB1 728 aaPredicted RBP12.89□□□□□ -0.35
RFC4-208ENST00000447345 ATXN2LQ8WWM7 1075 aaKnown RBP12.89□□□□□ -0.35
RFC4-208ENST00000447345 PIK3R5Q8WYR1 880 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 ASB2Q96Q27 587 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 TSPAN18Q96SJ8 248 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 KIAA1586Q9HCI6 787 aa12.89□□□□□ -0.35
RFC4-208ENST00000447345 TIMM13Q9Y5L4 95 aaPredicted RBP12.89□□□□□ -0.35
RFC4-208ENST00000447345 DOCK6Q96HP0 2047 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 FSD2A1L4K1 749 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 SPTLC1O15269 473 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 ADAM12O43184 909 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 SPATA31D3P0C874 917 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 TNNI1P19237 187 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 NR2F2P24468 414 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 CASP4P49662 377 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 CLCN4P51793 760 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 POU5F1Q01860 360 aaKnown RBP12.88□□□□□ -0.35
RFC4-208ENST00000447345 SURF1Q15526 300 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 AAK1Q2M2I8 961 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 LEXMQ3ZCV2 418 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 VARS2Q5ST30 1063 aaKnown RBP12.88□□□□□ -0.35
RFC4-208ENST00000447345 SCARA3Q6AZY7 606 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 PTCRAQ6ISU1 281 aaPredicted RBP12.88□□□□□ -0.35
RFC4-208ENST00000447345 CLEC17AQ6ZS10 378 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 SPATA31D4Q6ZUB0 917 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 NT5DC4Q86YG4 428 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 C1orf127Q8N9H9 656 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.88□□□□□ -0.35
RFC4-208ENST00000447345 SPATA20Q8TB22 786 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 CASP10Q92851 521 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 ANKRD36BP1Q96IX9 119 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 SUSD3Q96L08 255 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 FBXL18Q96ME1 805 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 FNBP1Q96RU3 617 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 POP1Q99575 1024 aaKnown RBP12.88□□□□□ -0.35
RFC4-208ENST00000447345 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.88□□□□□ -0.35
RFC4-208ENST00000447345 LMBRD1Q9NUN5 540 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 CD207Q9UJ71 328 aa12.88□□□□□ -0.35
RFC4-208ENST00000447345 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.88□□□□□ -0.35
RFC4-208ENST00000447345 ANO9A1A5B4 782 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 TRIM49BA6NDI0 452 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 GOLGA6L22H0YM25 854 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 PIRO00625 290 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 SYN3O14994 580 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 CLSTN1O94985 981 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 GLUD1P00367 558 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 TNNC2P02585 160 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 IL9P15248 144 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 ARPP19P56211 112 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 CREMQ03060 361 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 BFSP1Q12934 665 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 KCNC3Q14003 757 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 PSMD6Q15008 389 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 TJAP1Q5JTD0 557 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 KLHL10Q6JEL2 608 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 ANKRD54Q6NXT1 300 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 PPFIBP1Q86W92 1011 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 WDR49Q8IV35 697 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 ELOA2Q8IYF1 753 aaPredicted RBP12.87□□□□□ -0.35
RFC4-208ENST00000447345 CSGALNACT2Q8N6G5 542 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 C12orf76Q8N812 135 aaPredicted RBP12.87□□□□□ -0.35
RFC4-208ENST00000447345 SLC22A17Q8WUG5 538 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 CACTINQ8WUQ7 758 aaKnown RBP12.87□□□□□ -0.35
RFC4-208ENST00000447345 EEF2KMTQ96G04 330 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 MSLNLQ96KJ4 702 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 CGRRF1Q99675 332 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 CLSTN3Q9BQT9 956 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 RXFP1Q9HBX9 757 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 MAN1C1Q9NR34 630 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 INTS13Q9NVM9 706 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 MTRRQ9UBK8 725 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 CDH22Q9UJ99 828 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms