RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 MORF4L2Q15014 288 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 EGFLAMQ63HQ2 1017 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 TLDC1Q6P9B6 456 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 NUP93Q8N1F7 819 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 MINDY2Q8NBR6 621 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 GALNT6Q8NCL4 622 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 ZNF555Q8NEP9 628 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 TSPAN14Q8NG11 270 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 CCDC127Q96BQ5 260 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 SUCLG2Q96I99 432 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 WDR12Q9GZL7 423 aaKnown RBP5.41□□□□□ -1.54
SCN11A-202ENST00000444237 GLT8D2Q9H1C3 349 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 RNPEPQ9H4A4 650 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 AGPAT5Q9NUQ2 364 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 GCNT4Q9P109 453 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 TRMT112Q9UI30 125 aaKnown RBP5.41□□□□□ -1.54
SCN11A-202ENST00000444237 MROH7-TTC4A0A0A0MT08 1334 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 DIP2AQ14689 1571 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 ATP7BP35670 1465 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 C1orf167Q5SNV9 1468 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 PABPN1LA6NDY0 278 aaKnown RBP5.41□□□□□ -1.54
SCN11A-202ENST00000444237 PRR23AA6NEV1 266 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 FAM196BA6NMK8 535 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 ATP5J2-PTCD1G3V325 749 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 AGPSO00116 658 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 AKAP10O43572 662 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 RARAP10276 462 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 VDRP11473 427 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 FLT3P36888 993 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 RTP1P59025 263 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 MAPK7Q13164 816 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 ZNF211Q13398 564 aaPredicted RBP5.41□□□□□ -1.54
SCN11A-202ENST00000444237 EFTUD2Q15029 972 aaKnown RBP eCLIP5.41□□□□□ -1.54
SCN11A-202ENST00000444237 RASA2Q15283 850 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 TJAP1Q5JTD0 557 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 BTN2A1Q7KYR7 527 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 GPBP1Q86WP2 473 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 C4orf33Q8N1A6 199 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 MAGEB6Q8N7X4 407 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 FNIP1Q8TF40 1166 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 XAGE3Q8WTP9 111 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 LPIN2Q92539 896 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 DCAF5Q96JK2 942 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 ERGIC2Q96RQ1 377 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 GPATCH1Q9BRR8 931 aaKnown RBP5.41□□□□□ -1.54
SCN11A-202ENST00000444237 MMTAG2Q9BU76 263 aaKnown RBP5.41□□□□□ -1.54
SCN11A-202ENST00000444237 KIAA1683Q9H0B3 1180 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 STOML2Q9UJZ1 356 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 PLAGL2Q9UPG8 496 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 LRRC42Q9Y546 428 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 TULP4Q9NRJ4 1543 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 SLC26A4O43511 780 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 DDAH1O94760 285 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 PARNO95453 639 aaKnown RBP5.41□□□□□ -1.54
SCN11A-202ENST00000444237 CBX6O95503 412 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 TKTP29401 623 aaKnown RBP5.41□□□□□ -1.54
SCN11A-202ENST00000444237 ZNF200P98182 395 aaPredicted RBP5.41□□□□□ -1.54
SCN11A-202ENST00000444237 MYL7Q01449 175 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 IL1RL1Q01638 556 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 CMPK2Q5EBM0 449 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 CCSAPQ6IQ19 270 aaPredicted RBP5.41□□□□□ -1.54
SCN11A-202ENST00000444237 SMYD1Q8NB12 490 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 SOX13Q9UN79 622 aa5.41□□□□□ -1.54
SCN11A-202ENST00000444237 CENPXA8MT69 81 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.4□□□□□ -1.54
SCN11A-202ENST00000444237 TBC1D4O60343 1298 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 COPB2P35606 906 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 CCNFP41002 786 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 RECQLP46063 649 aaPredicted RBP5.4□□□□□ -1.54
SCN11A-202ENST00000444237 CLK1P49759 484 aaKnown RBP5.4□□□□□ -1.54
SCN11A-202ENST00000444237 GPC5P78333 572 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 MAP3K10Q02779 954 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 NR5A1Q13285 461 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 CNGA2Q16280 664 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 CDKAL1Q5VV42 579 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 LMBRD2Q68DH5 695 aaPredicted RBP5.4□□□□□ -1.54
SCN11A-202ENST00000444237 RNF19BQ6ZMZ0 732 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 CCNJLQ8IV13 435 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 TTC8Q8TAM2 541 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 ZNF333Q96JL9 665 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 CDHR1Q96JP9 859 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 SLC39A3Q9BRY0 314 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 TMEM79Q9BSE2 394 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 CELF4Q9BZC1 486 aaKnown RBP5.4□□□□□ -1.54
SCN11A-202ENST00000444237 TRIM39Q9HCM9 518 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 RPRD1BQ9NQG5 326 aaKnown RBP5.4□□□□□ -1.54
SCN11A-202ENST00000444237 ARHGEF3Q9NR81 526 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 PNMA3Q9UL41 463 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 PCDHGA3Q9Y5H0 932 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 C15orf38-AP3S2A0A0A6YYH1 394 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 CCDC195A0A1B0GUA6 201 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 RNMTO43148 476 aaKnown RBP5.4□□□□□ -1.54
SCN11A-202ENST00000444237 TPBGLP0DKB5 382 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 HOXD12P35452 270 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 PIK3CAP42336 1068 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 LIFRP42702 1097 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 BPIFB4P59827 614 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 ERVK-9P63128 1117 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 PLOD1Q02809 727 aaPredicted RBP5.4□□□□□ -1.54
SCN11A-202ENST00000444237 SLC15A2Q16348 729 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms