RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 PSMD6Q15008 389 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 FAM171A1Q5VUB5 890 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 CENPPQ6IPU0 288 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 PDE12Q6L8Q7 609 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 RDH13Q8NBN7 331 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 PIK3R5Q8WYR1 880 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 PABPC5Q96DU9 382 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 SUSD3Q96L08 255 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 POP1Q99575 1024 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 CLSTN3Q9BQT9 956 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 MTMR12Q9C0I1 747 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 IGFLR1Q9H665 355 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 PUF60Q9UHX1 559 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 HCFC2Q9Y5Z7 792 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 A0A0C4DFX4 3053 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 CUL9Q8IWT3 2517 aa13.92□□□□□ -0.18
PDLIM2-212ENST00000443561 CARNS1A5YM72 827 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 LRRIQ3A6PVS8 624 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 H3BQ06 376 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 M0QZQ0 153 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 TADA2AO75478 443 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 RPL9P32969 192 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 KCNQ1P51787 676 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 MRPL58Q14197 206 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 SYCE2Q6PIF2 218 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 HS2ST1Q7LGA3 356 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 MICAL1Q8TDZ2 1067 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 NOC3LQ8WTT2 800 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 EEF2KMTQ96G04 330 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 TSPAN18Q96SJ8 248 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 DUSP9Q99956 384 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 TLE6Q9H808 572 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 INTS13Q9NVM9 706 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 DPP3Q9NY33 737 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 CLDND1Q9NY35 253 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 KIAA1468Q9P260 1216 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 CGNQ9P2M7 1197 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 PTPRDP23468 1912 aa13.91□□□□□ -0.18
PDLIM2-212ENST00000443561 ZNF233A6NK53 670 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 SMC2O95347 1197 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 VNN2O95498 520 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 URODP06132 367 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 CLCN4P51793 760 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 LILRA4P59901 499 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 CLDN10P78369 228 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 TFAMQ00059 246 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 USP41Q3LFD5 358 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 ANKRD40Q6AI12 368 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 TTI2Q6NXR4 508 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 LLGL2Q6P1M3 1020 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 LILRA6Q6PI73 481 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 TMEM184AQ6ZMB5 413 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 BEST2Q8NFU1 509 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 PARD3BQ8TEW8 1205 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 RIN2Q8WYP3 895 aaPredicted RBP13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 ELMO3Q96BJ8 720 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 CGRRF1Q99675 332 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 RTP3Q9BQQ7 232 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 TTPALQ9BTX7 342 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 THEGQ9P2T0 379 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 MTRRQ9UBK8 725 aa13.9□□□□□ -0.18
PDLIM2-212ENST00000443561 GRXCR2A6NFK2 248 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 EXOC3O60645 756 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 VNN1O95497 513 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 ITGB3P05106 788 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 KCNA5P22460 613 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 NR2F2P24468 414 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 POLR2BP30876 1174 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 MYBPC2Q14324 1141 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 SKIV2LQ15477 1246 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 EDRF1Q3B7T1 1238 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 VARS2Q5ST30 1063 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 TDRD10Q5VZ19 366 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 RBM43Q6ZSC3 357 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 NT5DC4Q86YG4 428 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 GLYCTKQ8IVS8 523 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 GPR65Q8IYL9 337 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 HLA-CQ95604 372 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 GBP4Q96PP9 640 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 CDCA3Q99618 268 aaPredicted RBP13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 S1PR5Q9H228 398 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 MRPL17Q9NRX2 175 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 RMND1Q9NWS8 449 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 FNIP2Q9P278 1114 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 NME7Q9Y5B8 376 aa13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 TIMM13Q9Y5L4 95 aaPredicted RBP13.89□□□□□ -0.19
PDLIM2-212ENST00000443561 VCANP13611 3396 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 DOCK8Q8NF50 2099 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 LRRN2O75325 713 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 CST3P01034 146 aaPredicted RBP13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 CCNE1P24864 410 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 MCM4P33991 863 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 CLUL1Q15846 466 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 PSMD5Q16401 504 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 C15orf39Q6ZRI6 1047 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 LIMS2Q7Z4I7 341 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 CEP57Q86XR8 500 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms