RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 ANP32DO95626 131 aa13.96□□□□□ -0.18
SLC48A1-201ENST00000442218 TARSP26639 723 aaKnown RBP13.96□□□□□ -0.18
SLC48A1-201ENST00000442218 DSG3P32926 999 aa13.96□□□□□ -0.18
SLC48A1-201ENST00000442218 NBPF12Q5TAG4 269 aaPredicted RBP13.96□□□□□ -0.18
SLC48A1-201ENST00000442218 CGB2Q6NT52 195 aa13.96□□□□□ -0.18
SLC48A1-201ENST00000442218 MICALL2Q8IY33 904 aa13.96□□□□□ -0.18
SLC48A1-201ENST00000442218 ZNF516Q92618 1163 aa13.96□□□□□ -0.18
SLC48A1-201ENST00000442218 TMEM143Q96AN5 459 aa13.96□□□□□ -0.18
SLC48A1-201ENST00000442218 AGO4Q9HCK5 861 aaKnown RBP13.96□□□□□ -0.18
SLC48A1-201ENST00000442218 HOMER3Q9NSC5 361 aa13.96□□□□□ -0.18
SLC48A1-201ENST00000442218 GTF3C4Q9UKN8 822 aa13.96□□□□□ -0.18
SLC48A1-201ENST00000442218 ATAD5Q96QE3 1844 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 GRIN3BO60391 1043 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 TTC4O95801 387 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 ORC1Q13415 861 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 BAATQ14032 418 aaPredicted RBP13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 PLCB4Q15147 1175 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 SMTNL2Q2TAL5 461 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 LACTB2Q53H82 288 aaPredicted RBP13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 FKBP1CQ5VVH2 108 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 ACAD10Q6JQN1 1059 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 SPATA21Q7Z572 469 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 FAM83AQ86UY5 434 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 TMEM161BQ8NDZ6 487 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 ZNF526Q8TF50 670 aaPredicted RBP13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 DDX1Q92499 740 aaKnown RBP13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 RPS6KC1Q96S38 1066 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 VPS37BQ9H9H4 285 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 ZNF541Q9H0D2 1346 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 MGRN1O60291 552 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 CYP1A2P05177 515 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 EFTUD2Q15029 972 aaKnown RBP eCLIP13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 MTERF2Q49AM1 385 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 TRIM68Q6AZZ1 485 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 SWSAP1Q6NVH7 229 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 SNF8Q96H20 258 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 DCLK3Q9C098 648 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 SUFUQ9UMX1 484 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 SLC12A4Q9UP95 1085 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 ZNF148Q9UQR1 794 aa13.95□□□□□ -0.18
SLC48A1-201ENST00000442218 ASAP2O43150 1006 aa13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 KRT15P19012 456 aa13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 IVDP26440 423 aa13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 NSFP46459 744 aaKnown RBP13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 ZNF280AP59817 542 aaPredicted RBP13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 OVGP1Q12889 678 aa13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 DMP1Q13316 513 aaPredicted RBP13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 SCARA5Q6ZMJ2 495 aa13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 CDR2LQ86X02 465 aaPredicted RBP13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 RBM15Q96T37 977 aaKnown RBP eCLIP13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 NSRP1Q9H0G5 558 aaKnown RBP13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 YY1AP1Q9H869 796 aa13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 ETNK1Q9HBU6 452 aa13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 SEPT9Q9UHD8 586 aaPredicted RBP13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 CNOT7Q9UIV1 285 aaKnown RBP13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 DNAJC8O75937 253 aaPredicted RBP13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 NQO1P15559 274 aaKnown RBP13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 DRG2P55039 364 aaKnown RBP13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 NLRP11P59045 1033 aaKnown RBP13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 SMAD1Q15797 465 aaKnown RBP13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 EEPD1Q7L9B9 569 aa13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 MCOLN2Q8IZK6 566 aa13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 PARP2Q9UGN5 583 aa13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 HAO1Q9UJM8 370 aa13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 DNPEPQ9ULA0 475 aa13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 CTDP1Q9Y5B0 961 aaPredicted RBP13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 PCDHB4Q9Y5E5 795 aa13.94□□□□□ -0.18
SLC48A1-201ENST00000442218 A0A1W2PPM1 405 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 FZD9O00144 591 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 ZNF862O60290 1169 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 SUN1O94901 812 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 PKN2Q16513 984 aaKnown RBP13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 PPP2R5EQ16537 467 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 CLEC16AQ2KHT3 1053 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 KCNT1Q5JUK3 1230 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 SLC9A9Q8IVB4 645 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 ERP27Q96DN0 273 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 ZBTB10Q96DT7 871 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 PITPNM3Q9BZ71 974 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 R3HDMLQ9H3Y0 253 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 RPAP3Q9H6T3 665 aaPredicted RBP13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 DCTN4Q9UJW0 460 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 GGA2Q9UJY4 613 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 EXOC1LA0A1B0GW35 172 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 CBX6O95503 412 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 PIK3CAP42336 1068 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 WDR4P57081 412 aaKnown RBP13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 TMEM63BQ5T3F8 832 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 CYP4A22Q5TCH4 519 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 MIS18BP1Q6P0N0 1132 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 B3GNT9Q6UX72 402 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 ARMC9Q7Z3E5 817 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 ECHDC2Q86YB7 292 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 ANKLE1Q8NAG6 615 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 CENPTQ96BT3 561 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 EHMT1Q9H9B1 1298 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 C1orf112Q9NSG2 853 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 NKIRAS1Q9NYS0 192 aa13.93□□□□□ -0.18
SLC48A1-201ENST00000442218 ADAM22Q9P0K1 906 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms