RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CARNS1A5YM72 827 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 CASTOR2A6NHX0 329 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 BTNL10A8MVZ5 291 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 ZNF862O60290 1169 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 USP8P40818 1118 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 MCCD1P59942 119 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 CYP27A1Q02318 531 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 TSEN2Q8NCE0 465 aaKnown RBP7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 KATNBL1Q9H079 304 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 GANQ9H2C0 597 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 MRPL17Q9NRX2 175 aaKnown RBP7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 PCDHA13Q9Y5I0 950 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 PDXDC1Q6P996 788 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 SLC27A1Q6PCB7 646 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 ANO5Q75V66 913 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 EPM2AIP1Q7L775 607 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 CSGALNACT2Q8N6G5 542 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 RIN2Q8WYP3 895 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 HERVK_113Q902F9 699 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 RAD54LQ92698 747 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 SELENOOQ9BVL4 669 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 EDEM3Q9BZQ6 932 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 AGO3Q9H9G7 860 aaKnown RBP7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 TYW1Q9NV66 732 aaKnown RBP7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 SLC38A7Q9NVC3 462 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 TMEM161AQ9NX61 479 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 CYP3A7-CYP3A51PA0A087WV96 503 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 GOLGA8IPA6NC78 632 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 GOLGA8JA6NMD2 632 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 MYO1CO00159 1063 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 TRIM66O15016 1216 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 RNF40O75150 1001 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 CYP3A7P24462 503 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 AXLP30530 894 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 GGCXP38435 758 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 NAMPTP43490 491 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 SCNN1GP51170 649 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 SMAD3P84022 425 aaKnown RBP7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 TTMPQ5BVD1 217 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 ARSHQ5FYA8 562 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 CCDC122Q5T0U0 273 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 C1orf53Q5VUE5 145 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 IQCKQ8N0W5 287 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 THEM5Q8N1Q8 247 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 C1orf131Q8NDD1 294 aaKnown RBP7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 ANKRD36BP1Q96IX9 119 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 NDST4Q9H3R1 872 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 CHST12Q9NRB3 414 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 VPS18Q9P253 973 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 DBR1Q9UK59 544 aaKnown RBP7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 SSX2IPQ9Y2D8 614 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 JRKLQ9Y4A0 524 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 PCDHGC5Q9Y5F6 944 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 PHIPQ8WWQ0 1821 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 SSU72P8A0A1W2PR75 194 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 H3BQ06 376 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 PSMA7O14818 248 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 C22orf31O95567 290 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 PBX3P40426 434 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 MLH1P40692 756 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 PPP1R2P41236 205 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 KRT83P78385 493 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 SKOR1P84550 965 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 PALB2Q86YC2 1186 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 GSPT2Q8IYD1 628 aaKnown RBP7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 MREGQ8N565 214 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 SPATA4Q8NEY3 305 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 BORCS6Q96GS4 357 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 OSBPL9Q96SU4 736 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 TCF25Q9BQ70 676 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 SYT11Q9BT88 431 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 LRRC1Q9BTT6 524 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 WNT8AQ9H1J5 351 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 KCNMB3Q9NPA1 279 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 SNTG2Q9NY99 539 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 FBXL21Q9UKT6 434 aa7.92□□□□□ -1.14
CDC42BPA-208ENST00000442054 PARP14Q460N5 1801 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 NBNO60934 754 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 FGFR1OPO95684 399 aaKnown RBP7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 ELAVL2Q12926 359 aaKnown RBP7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 FAM171A1Q5VUB5 890 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 TRIM59Q8IWR1 403 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 VPS52Q8N1B4 723 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 POF1BQ8WVV4 589 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 DDX12PQ92771 950 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 CDX2Q99626 313 aaPredicted RBP7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 TMEM206Q9H813 350 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 FAM204AQ9H8W3 233 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 SLC39A2Q9NP94 309 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.91□□□□□ -1.143e-8■■■■■ 179.9
CDC42BPA-208ENST00000442054 THEGQ9P2T0 379 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 USP20Q9Y2K6 914 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 TELO2Q9Y4R8 837 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 BICDL2A1A5D9 508 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 LRRC53A6NM62 1247 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 LRG1P02750 347 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 KIF11P52732 1056 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 SLC8A3P57103 927 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 LRRC63Q05C16 580 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 C2orf54Q08AI8 447 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms