RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 ZNF277Q9NRM2 450 aaPredicted RBP17.54■□□□□ 0.4
SEMA3B-207ENST00000441915 H0YCG3 227 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 CCND2P30279 289 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 ABCD1P33897 745 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 PIK3CAP42336 1068 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 VSIG10LQ86VR7 867 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 GBP7Q8N8V2 638 aaPredicted RBP17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 CKAP2Q8WWK9 683 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 OSBPL8Q9BZF1 889 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 ADAM22Q9P0K1 906 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 TBK1Q9UHD2 729 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 UMODL1Q5DID0 1318 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 CCDC189A1A4V9 331 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 WNT10BO00744 389 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 HLA-DRAP01903 254 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 CLDN10P78369 228 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 SWSAP1Q6NVH7 229 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 TRIM72Q6ZMU5 477 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 ARHGEF18Q6ZSZ5 1173 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 AGBL3Q8NEM8 1001 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 FAM212AQ96EL1 285 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 PWWP2AQ96N64 755 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 ATP6V0A4Q9HBG4 840 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 ARHGAP28Q9P2N2 729 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 SEPT9Q9UHD8 586 aaPredicted RBP17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 NEU2Q9Y3R4 380 aa17.53■□□□□ 0.4
SEMA3B-207ENST00000441915 GSTTP1A0A1W2PQM5 241 aa17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 PSAPP07602 524 aa17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 NR3C2P08235 984 aa17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 EZRP15311 586 aaKnown RBP17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 STX2P32856 288 aa17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 BAATQ14032 418 aaPredicted RBP17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 NEDD9Q14511 834 aa17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 PSMD6Q15008 389 aa17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 TAS1R3Q7RTX0 852 aa17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 TBC1D1Q86TI0 1168 aaPredicted RBP17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 KATNAL2Q8IYT4 538 aa17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 GDAP1Q8TB36 358 aa17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 TCP11Q8WWU5 503 aa17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 PLCD4Q9BRC7 762 aa17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 XPNPEP1Q9NQW7 623 aa17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 RGPD3A6NKT7 1758 aaPredicted RBP17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 RGPD4Q7Z3J3 1758 aa17.52■□□□□ 0.4
SEMA3B-207ENST00000441915 O00370 1275 aa17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 UBOX5O94941 541 aa17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 ATP6V1G2O95670 118 aa17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 SSR1P43307 286 aaKnown RBP17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 STAT4Q14765 748 aa17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 TDRD10Q5VZ19 366 aaKnown RBP17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 IZUMO3Q5VZ72 239 aa17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 GSTA5Q7RTV2 222 aa17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 PASD1Q8IV76 773 aa17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 VCPIP1Q96JH7 1222 aa17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 FAM118BQ9BPY3 351 aa17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 PDLIM7Q9NR12 457 aa17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 NKIRAS1Q9NYS0 192 aa17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 BAIAP2L1Q9UHR4 511 aa17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 LGALS13Q9UHV8 139 aa17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 SCAF8Q9UPN6 1271 aaKnown RBP17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 SCINQ9Y6U3 715 aa17.52■□□□□ 0.39
SEMA3B-207ENST00000441915 FOXO6A8MYZ6 492 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 STBD1O95210 358 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 GH1P01241 217 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 C4BPAP04003 597 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 CLTAP09496 248 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 GNA15P30679 374 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 CETN2P41208 172 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 TAS2R40P59535 323 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 MKRN3Q13064 507 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 MAMLD1Q13495 774 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 SPOPLQ6IQ16 392 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 PNMA8AQ86V59 439 aaPredicted RBP17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 RELL1Q8IUW5 271 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 EXD1Q8NHP7 514 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 POLR3FQ9H1D9 316 aaPredicted RBP17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 CYP26B1Q9NR63 512 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 GGT7Q9UJ14 662 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 NAALADL1Q9UQQ1 740 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 USTQ9Y2C2 406 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 TLR3O15455 904 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 FDX1P10109 184 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 DSG3P32926 999 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 GJC1P36383 396 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 NOMO3P69849 1222 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 SP4Q02446 784 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 STRN3Q13033 797 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 CUL2Q13617 745 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 TMEM270Q6UE05 265 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 CEP128Q6ZU80 1094 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 SPATA21Q7Z572 469 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 SRRM1Q8IYB3 904 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 ABRAQ8N0Z2 381 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 CYP4X1Q8N118 509 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 TTLL6Q8N841 843 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 C9orf72Q96LT7 481 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 TGS1Q96RS0 853 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 RPAP3Q9H6T3 665 aaPredicted RBP17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 NOD2Q9HC29 1040 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 RNF146Q9NTX7 359 aa17.51■□□□□ 0.39
SEMA3B-207ENST00000441915 ARL2BPQ9Y2Y0 163 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms