RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 MTRRQ9UBK8 725 aa25.66■■□□□ 1.7
VARS-217ENST00000440048 PI4K2BG5E9Z4 385 aa25.65■■□□□ 1.7
VARS-217ENST00000440048 LDHAP00338 332 aaKnown RBP25.65■■□□□ 1.7
VARS-217ENST00000440048 MCM4P33991 863 aa25.65■■□□□ 1.7
VARS-217ENST00000440048 MTHFRP42898 656 aa25.65■■□□□ 1.7
VARS-217ENST00000440048 ARMCX5Q6P1M9 558 aa25.65■■□□□ 1.7
VARS-217ENST00000440048 ANKS3Q6ZW76 656 aa25.65■■□□□ 1.7
VARS-217ENST00000440048 SCFD1Q8WVM8 642 aa25.65■■□□□ 1.7
VARS-217ENST00000440048 SUSD3Q96L08 255 aa25.65■■□□□ 1.7
VARS-217ENST00000440048 SLC39A2Q9NP94 309 aa25.65■■□□□ 1.7
VARS-217ENST00000440048 DPP7Q9UHL4 492 aa25.65■■□□□ 1.7
VARS-217ENST00000440048 C2CD2Q9Y426 696 aa25.65■■□□□ 1.7
VARS-217ENST00000440048 C2orf16Q68DN1 1984 aa25.65■■□□□ 1.7
VARS-217ENST00000440048 UBE4BO95155 1302 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 GOLGA8IPA6NC78 632 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 GOLGA8JA6NMD2 632 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 SYN3O14994 580 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 EXTL3O43909 919 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 IL18RAPO95256 599 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 ALADP13716 330 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 ELMSAN1Q6PJG2 1045 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 RSPO2Q6UXX9 243 aaPredicted RBP25.64■■□□□ 1.7
VARS-217ENST00000440048 BRSK2Q8IWQ3 736 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 HDAC7Q8WUI4 952 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 KHSRPQ92945 711 aaKnown RBP eCLIP25.64■■□□□ 1.7
VARS-217ENST00000440048 RIPOR3Q96MK2 946 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 NECTIN4Q96NY8 510 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 PLEKHA4Q9H4M7 779 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 POMKQ9H5K3 350 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 EPHX3Q9H6B9 360 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 BACE2Q9Y5Z0 518 aa25.64■■□□□ 1.7
VARS-217ENST00000440048 LOC730098B7Z3J9 87 aa25.63■■□□□ 1.69
VARS-217ENST00000440048 PPEF2O14830 753 aa25.63■■□□□ 1.69
VARS-217ENST00000440048 WNT7BP56706 349 aa25.63■■□□□ 1.69
VARS-217ENST00000440048 ATAT1Q5SQI0 421 aa25.63■■□□□ 1.69
VARS-217ENST00000440048 VARS2Q5ST30 1063 aaKnown RBP25.63■■□□□ 1.69
VARS-217ENST00000440048 GPR149Q86SP6 731 aa25.63■■□□□ 1.69
VARS-217ENST00000440048 NELFCDQ8IXH7 590 aa25.63■■□□□ 1.69
VARS-217ENST00000440048 EFCAB13Q8IY85 973 aa25.63■■□□□ 1.69
VARS-217ENST00000440048 KREMEN2Q8NCW0 462 aa25.63■■□□□ 1.69
VARS-217ENST00000440048 CMASQ8NFW8 434 aaPredicted RBP25.63■■□□□ 1.69
VARS-217ENST00000440048 RPGRIP1Q96KN7 1286 aa25.63■■□□□ 1.69
VARS-217ENST00000440048 SCN1AP35498 2009 aa25.63■■□□□ 1.69
VARS-217ENST00000440048 KIAA0391O15091 583 aaKnown RBP25.62■■□□□ 1.69
VARS-217ENST00000440048 TGFB1I1O43294 461 aa25.62■■□□□ 1.69
VARS-217ENST00000440048 MYL1P05976 194 aa25.62■■□□□ 1.69
VARS-217ENST00000440048 OR1D2P34982 312 aa25.62■■□□□ 1.69
VARS-217ENST00000440048 RAB33AQ14088 237 aa25.62■■□□□ 1.69
VARS-217ENST00000440048 KMT5BQ4FZB7 885 aa25.62■■□□□ 1.69
VARS-217ENST00000440048 GPD1LQ8N335 351 aa25.62■■□□□ 1.69
VARS-217ENST00000440048 NOC3LQ8WTT2 800 aaKnown RBP25.62■■□□□ 1.69
VARS-217ENST00000440048 EXOC1Q9NV70 894 aa25.62■■□□□ 1.69
VARS-217ENST00000440048 RBAKQ9NYW8 714 aaPredicted RBP25.62■■□□□ 1.69
VARS-217ENST00000440048 FBXW11Q9UKB1 542 aa25.62■■□□□ 1.69
VARS-217ENST00000440048 PCDHB8Q9UN66 801 aa25.62■■□□□ 1.69
VARS-217ENST00000440048 CDY1Q9Y6F8 540 aa25.62■■□□□ 1.69
VARS-217ENST00000440048 CCDC195A0A1B0GUA6 201 aa25.61■■□□□ 1.69
VARS-217ENST00000440048 RFPL2O75678 378 aa25.61■■□□□ 1.69
VARS-217ENST00000440048 ZNF202O95125 648 aa25.61■■□□□ 1.69
VARS-217ENST00000440048 AARSP49588 968 aaKnown RBP eCLIP25.61■■□□□ 1.69
VARS-217ENST00000440048 MRPL58Q14197 206 aaKnown RBP25.61■■□□□ 1.69
VARS-217ENST00000440048 BMT2Q1RMZ1 405 aa25.61■■□□□ 1.69
VARS-217ENST00000440048 C9orf57Q5W0N0 161 aa25.61■■□□□ 1.69
VARS-217ENST00000440048 KRBA2Q6ZNG9 492 aa25.61■■□□□ 1.69
VARS-217ENST00000440048 C15orf39Q6ZRI6 1047 aa25.61■■□□□ 1.69
VARS-217ENST00000440048 DPP3Q9NY33 737 aa25.61■■□□□ 1.69
VARS-217ENST00000440048 DENND4AQ7Z401 1863 aa25.6■■□□□ 1.69
VARS-217ENST00000440048 ANO9A1A5B4 782 aa25.6■■□□□ 1.69
VARS-217ENST00000440048 M0QZQ0 153 aa25.6■■□□□ 1.69
VARS-217ENST00000440048 PIRO00625 290 aa25.6■■□□□ 1.69
VARS-217ENST00000440048 TBC1D4O60343 1298 aa25.6■■□□□ 1.69
VARS-217ENST00000440048 PRR29P0C7W0 189 aa25.6■■□□□ 1.69
VARS-217ENST00000440048 STK4Q13043 487 aa25.6■■□□□ 1.69
VARS-217ENST00000440048 NT5DC4Q86YG4 428 aa25.6■■□□□ 1.69
VARS-217ENST00000440048 APPL2Q8NEU8 664 aa25.6■■□□□ 1.69
VARS-217ENST00000440048 AGPAT3Q9NRZ7 376 aa25.6■■□□□ 1.69
VARS-217ENST00000440048 HSPBP1Q9NZL4 362 aa25.6■■□□□ 1.69
VARS-217ENST00000440048 TRIOO75962 3097 aa25.59■■□□□ 1.69
VARS-217ENST00000440048 H7C4K7 107 aa25.59■■□□□ 1.69
VARS-217ENST00000440048 TULP1O00294 542 aaPredicted RBP25.59■■□□□ 1.69
VARS-217ENST00000440048 GPR37L1O60883 481 aa25.59■■□□□ 1.69
VARS-217ENST00000440048 PAPLNO95428 1278 aa25.59■■□□□ 1.69
VARS-217ENST00000440048 LILRA4P59901 499 aa25.59■■□□□ 1.69
VARS-217ENST00000440048 PSMD2Q13200 908 aa25.59■■□□□ 1.69
VARS-217ENST00000440048 TMEM31Q5JXX7 168 aa25.59■■□□□ 1.69
VARS-217ENST00000440048 KIAA0895Q8NCT3 520 aa25.59■■□□□ 1.69
VARS-217ENST00000440048 ZDHHC7Q9NXF8 308 aa25.59■■□□□ 1.69
VARS-217ENST00000440048 CIZ1Q9ULV3 898 aaPredicted RBP25.59■■□□□ 1.69
VARS-217ENST00000440048 GOLGA6L4A6NEF3 574 aa25.58■■□□□ 1.69
VARS-217ENST00000440048 CLIC2O15247 247 aa25.58■■□□□ 1.69
VARS-217ENST00000440048 ZMYND10O75800 440 aa25.58■■□□□ 1.69
VARS-217ENST00000440048 RPN1P04843 607 aaKnown RBP25.58■■□□□ 1.69
VARS-217ENST00000440048 SP100P23497 879 aaPredicted RBP25.58■■□□□ 1.69
VARS-217ENST00000440048 SNRPFP62306 86 aaKnown RBP25.58■■□□□ 1.69
VARS-217ENST00000440048 KNOP1Q1ED39 458 aaKnown RBP25.58■■□□□ 1.69
VARS-217ENST00000440048 SLC8B1Q6J4K2 584 aa25.58■■□□□ 1.69
VARS-217ENST00000440048 CYP26C1Q6V0L0 522 aa25.58■■□□□ 1.69
VARS-217ENST00000440048 DSTYKQ6XUX3 929 aa25.58■■□□□ 1.69
VARS-217ENST00000440048 HS2ST1Q7LGA3 356 aa25.58■■□□□ 1.69
VARS-217ENST00000440048 RNF135Q8IUD6 432 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms