RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 ZNF180Q9UJW8 692 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 APOBEC2Q9Y235 224 aaKnown RBP6.71□□□□□ -1.34
BDNF-211ENST00000439476 ESYT2A0FGR8 921 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 GOLGA8IPA6NC78 632 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 GOLGA8JA6NMD2 632 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 IGF2BP3O00425 579 aaKnown RBP eCLIP6.71□□□□□ -1.34
BDNF-211ENST00000439476 COPEO14579 308 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 FANCGO15287 622 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 PLS3P13797 630 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 RASA1P20936 1047 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 ENPP1P22413 925 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 SLC1A1P43005 524 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 KRT76Q01546 638 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 ZNF844Q08AG5 666 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 STAT4Q14765 748 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 COL19A1Q14993 1142 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 GRAMD4Q6IC98 578 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 BARGINQ6ZT62 677 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 ACAD11Q709F0 780 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 BRINP3Q76B58 766 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 NDUFAF2Q8N183 169 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 DNAAF3Q8N9W5 541 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 ZBTB18Q99592 522 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 AGPAT1Q99943 283 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 CARD9Q9H257 536 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 LRRC4Q9HBW1 653 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 ASNSD1Q9NWL6 643 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 SRP68Q9UHB9 627 aaKnown RBP6.71□□□□□ -1.34
BDNF-211ENST00000439476 SEPT9Q9UHD8 586 aaPredicted RBP6.71□□□□□ -1.34
BDNF-211ENST00000439476 INTUQ9ULD6 942 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 TSC22D4Q9Y3Q8 395 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 ZNF711Q9Y462 761 aa6.71□□□□□ -1.34
BDNF-211ENST00000439476 A0A0G2JND7 137 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 TMEM120BA0PK00 339 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 SLC37A4O43826 429 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 KLRC4O43908 158 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 TMEM253P0C7T8 217 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 ITGA4P13612 1032 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 ENDOUP21128 410 aaKnown RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 NMT1P30419 496 aaKnown RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 IFNA8P32881 189 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 BASP1P80723 227 aaKnown RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 KRT17Q04695 432 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 KLC1Q07866 573 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 PDE1CQ14123 709 aaPredicted RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 NKX1-1Q15270 411 aaPredicted RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 FAM98CQ17RN3 349 aaKnown RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 DOK7Q18PE1 504 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 QRICH1Q2TAL8 776 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 SLC44A4Q53GD3 710 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 YTHDF3Q7Z739 585 aaKnown RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 ERICH1Q86X53 443 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 FUKQ8N0W3 1084 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 ERP27Q96DN0 273 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 OSBPL1AQ9BXW6 950 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 SMG5Q9UPR3 1016 aaKnown RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 SIK3Q9Y2K2 1263 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 ALG6Q9Y672 507 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 PEAK1Q9H792 1746 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 SMIM22K7EJ46 135 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 GNGT2O14610 69 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 EPHB6O15197 1021 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 SLC16A3O15427 465 aaKnown RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 GYG2O15488 501 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 MTRF1O75570 445 aaKnown RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 APOEP02649 317 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 VEGFAP15692 232 aaPredicted RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 DDX5P17844 614 aaKnown RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 CIITAP33076 1130 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 KCNJ1P48048 391 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 IL17AQ16552 155 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 GJB7Q6PEY0 223 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 ANO5Q75V66 913 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 TRMT10CQ7L0Y3 403 aaKnown RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 PTF1AQ7RTS3 328 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 ZC3H18Q86VM9 953 aaKnown RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 DNAAF5Q86Y56 855 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 VGLL2Q8N8G2 317 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 TEKT4Q8WW24 435 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 SNF8Q96H20 258 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 ABHD8Q96I13 439 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 REEP2Q9BRK0 252 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 C2orf40Q9H1Z8 148 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 ANKFY1Q9P2R3 1169 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 ZFP69BQ9UJL9 534 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 CPSF3Q9UKF6 684 aaKnown RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 PPEF1O14829 653 aaPredicted RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 TRAPPC3O43617 180 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 TMCC1O94876 653 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 ANP32DO95626 131 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 MYBP10242 640 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 AKR1B1P15121 316 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 OSBPP22059 807 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 TNFRSF8P28908 595 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 ARHGDIAP52565 204 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 CSE1LP55060 971 aaKnown RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 SNRPFP62306 86 aaKnown RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 AP2B1P63010 937 aa6.7□□□□□ -1.34
BDNF-211ENST00000439476 MKRN4PQ13434 485 aaPredicted RBP6.7□□□□□ -1.34
BDNF-211ENST00000439476 MIIPQ5JXC2 388 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms