RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 C2CD2LO14523 706 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 CETN3O15182 167 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 TNNC2P02585 160 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 ITGB3P05106 788 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 URODP06132 367 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 CTSAP10619 480 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 TNNI1P19237 187 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 POLR2BP30876 1174 aaKnown RBP17.46■□□□□ 0.39
SNRPB-202ENST00000438552 GLUD2P49448 558 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 NLRP12P59046 1061 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 DLG4P78352 724 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 SMC1AQ14683 1233 aaKnown RBP17.46■□□□□ 0.39
SNRPB-202ENST00000438552 PTPN14Q15678 1187 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 SCARA3Q6AZY7 606 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 CACTINQ8WUQ7 758 aaKnown RBP17.46■□□□□ 0.39
SNRPB-202ENST00000438552 STK39Q9UEW8 545 aa17.46■□□□□ 0.39
SNRPB-202ENST00000438552 BICDL2A1A5D9 508 aa17.45■□□□□ 0.38
SNRPB-202ENST00000438552 PTMSP20962 102 aa17.45■□□□□ 0.38
SNRPB-202ENST00000438552 TKTP29401 623 aaKnown RBP17.45■□□□□ 0.38
SNRPB-202ENST00000438552 PSMC2P35998 433 aaKnown RBP17.45■□□□□ 0.38
SNRPB-202ENST00000438552 FKBP3Q00688 224 aaKnown RBP17.45■□□□□ 0.38
SNRPB-202ENST00000438552 ELAVL2Q12926 359 aaKnown RBP17.45■□□□□ 0.38
SNRPB-202ENST00000438552 USP41Q3LFD5 358 aa17.45■□□□□ 0.38
SNRPB-202ENST00000438552 RTP2Q5QGT7 225 aa17.45■□□□□ 0.38
SNRPB-202ENST00000438552 FAM171A1Q5VUB5 890 aa17.45■□□□□ 0.38
SNRPB-202ENST00000438552 PDE12Q6L8Q7 609 aaKnown RBP17.45■□□□□ 0.38
SNRPB-202ENST00000438552 CEP57Q86XR8 500 aa17.45■□□□□ 0.38
SNRPB-202ENST00000438552 MLKLQ8NB16 471 aa17.45■□□□□ 0.38
SNRPB-202ENST00000438552 PARD3BQ8TEW8 1205 aa17.45■□□□□ 0.38
SNRPB-202ENST00000438552 NGRNQ9NPE2 291 aaKnown RBP17.45■□□□□ 0.38
SNRPB-202ENST00000438552 SIX4Q9UIU6 781 aa17.45■□□□□ 0.38
SNRPB-202ENST00000438552 ITGA11Q9UKX5 1188 aa17.45■□□□□ 0.38
SNRPB-202ENST00000438552 C2orf71A6NGG8 1288 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 PIRO00625 290 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 MAPK13O15264 365 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 SPTLC1O15269 473 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 SLC16A3O15427 465 aaKnown RBP17.44■□□□□ 0.38
SNRPB-202ENST00000438552 CXCL14O95715 111 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 KRT19P08727 400 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 TRIM49P0CI25 452 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 TRIM49CP0CI26 452 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 EPB41P11171 864 aaKnown RBP17.44■□□□□ 0.38
SNRPB-202ENST00000438552 GTF2F1P35269 517 aaKnown RBP eCLIP17.44■□□□□ 0.381e-6■□□□□ 8.3
SNRPB-202ENST00000438552 NRIP1P48552 1158 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 HYAL1Q12794 435 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 BFSP1Q12934 665 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 DUOXA2Q1HG44 320 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 KLHL40Q2TBA0 621 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 KIAA1841Q6NSI8 718 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 PRSS55Q6UWB4 352 aaPredicted RBP17.44■□□□□ 0.38
SNRPB-202ENST00000438552 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.44■□□□□ 0.38
SNRPB-202ENST00000438552 RBM23Q86U06 439 aaKnown RBP17.44■□□□□ 0.38
SNRPB-202ENST00000438552 CXorf38Q8TB03 319 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 TMC2Q8TDI7 906 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 RIN2Q8WYP3 895 aaPredicted RBP17.44■□□□□ 0.38
SNRPB-202ENST00000438552 ZNF516Q92618 1163 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 SUSD3Q96L08 255 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 MKNK1Q9BUB5 465 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 MRPL17Q9NRX2 175 aaKnown RBP17.44■□□□□ 0.38
SNRPB-202ENST00000438552 CHST7Q9NS84 486 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 AGAP1Q9UPQ3 857 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 PRUNE2Q8WUY3 3088 aa17.44■□□□□ 0.38
SNRPB-202ENST00000438552 PER2O15055 1255 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 TRAPPC3O43617 180 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 KRT13P13646 458 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 FGFR3P22607 806 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 AARSP49588 968 aaKnown RBP eCLIP17.43■□□□□ 0.38
SNRPB-202ENST00000438552 VAMP7P51809 220 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 LILRA4P59901 499 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 DSG1Q02413 1049 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 BMS1Q14692 1282 aaKnown RBP17.43■□□□□ 0.38
SNRPB-202ENST00000438552 C1orf220Q5T0J3 134 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 KIAA0319Q5VV43 1072 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 INTS8Q75QN2 995 aaKnown RBP17.43■□□□□ 0.38
SNRPB-202ENST00000438552 TRAPPC11Q7Z392 1133 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 CSGALNACT2Q8N6G5 542 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 MRPL43Q8N983 215 aaKnown RBP17.43■□□□□ 0.38
SNRPB-202ENST00000438552 SYAP1Q96A49 352 aaPredicted RBP17.43■□□□□ 0.38
SNRPB-202ENST00000438552 ZNF560Q96MR9 790 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 CEP63Q96MT8 703 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 MED15Q96RN5 788 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 TTPALQ9BTX7 342 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 RWDD2AQ9UIY3 292 aa17.43■□□□□ 0.38
SNRPB-202ENST00000438552 RPL17P18621 184 aaKnown RBP17.42■□□□□ 0.38
SNRPB-202ENST00000438552 TAF6P49848 677 aa17.42■□□□□ 0.38
SNRPB-202ENST00000438552 CLDN10P78369 228 aa17.42■□□□□ 0.38
SNRPB-202ENST00000438552 SV2CQ496J9 727 aa17.42■□□□□ 0.38
SNRPB-202ENST00000438552 TDRD10Q5VZ19 366 aaKnown RBP17.42■□□□□ 0.38
SNRPB-202ENST00000438552 FOXR2Q6PJQ5 311 aa17.42■□□□□ 0.38
SNRPB-202ENST00000438552 SASS6Q6UVJ0 657 aa17.42■□□□□ 0.38
SNRPB-202ENST00000438552 DSTYKQ6XUX3 929 aa17.42■□□□□ 0.38
SNRPB-202ENST00000438552 PPP2R3CQ969Q6 453 aa17.42■□□□□ 0.38
SNRPB-202ENST00000438552 BORCS6Q96GS4 357 aa17.42■□□□□ 0.38
SNRPB-202ENST00000438552 IGFLR1Q9H665 355 aa17.42■□□□□ 0.38
SNRPB-202ENST00000438552 TLE6Q9H808 572 aa17.42■□□□□ 0.38
SNRPB-202ENST00000438552 DACH1Q9UI36 760 aa17.42■□□□□ 0.38
SNRPB-202ENST00000438552 PCDHB8Q9UN66 801 aa17.42■□□□□ 0.38
SNRPB-202ENST00000438552 IRAK3Q9Y616 596 aa17.42■□□□□ 0.38
SNRPB-202ENST00000438552 M0QZQ0 153 aa17.41■□□□□ 0.38
SNRPB-202ENST00000438552 LINC01565O15544 149 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms