RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 PON2Q15165 354 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 C8orf34Q49A92 452 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 UBXN11Q5T124 520 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 TXNDC11Q6PKC3 985 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 MIER3Q7Z3K6 550 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 YAF2Q8IY57 180 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 SMG8Q8ND04 991 aaKnown RBP11.53□□□□□ -0.56
CPNE1-214ENST00000435747 LNX1Q8TBB1 728 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-214ENST00000435747 RABGGTAQ92696 567 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 FAM20AQ96MK3 541 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 ZFP42Q96MM3 310 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 SUCLA2Q9P2R7 463 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-214ENST00000435747 COL6A6A6NMZ7 2263 aa11.53□□□□□ -0.56
CPNE1-214ENST00000435747 WDR27A2RRH5 827 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 MYBPHLA2RUH7 354 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 ZNF197O14709 1029 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 JAK2O60674 1132 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 MAFO75444 373 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-214ENST00000435747 GCFC2P16383 781 aaKnown RBP11.52□□□□□ -0.57
CPNE1-214ENST00000435747 GBP1P32455 592 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 CTHP32929 405 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 NEK4P51957 841 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 RAB33AQ14088 237 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 ZNF423Q2M1K9 1284 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 MTERF2Q49AM1 385 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 XKR3Q5GH77 459 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 PRSS36Q5K4E3 855 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 FAM171A1Q5VUB5 890 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 PDXDC1Q6P996 788 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 PIK3AP1Q6ZUJ8 805 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 RAB44Q7Z6P3 723 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-214ENST00000435747 RALGPS2Q86X27 583 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-214ENST00000435747 KSR1Q8IVT5 923 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 MFSD6LQ8IWD5 586 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 TCEAL4Q96EI5 215 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 CORO1BQ9BR76 489 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 IPPQ9Y573 584 aa11.52□□□□□ -0.57
CPNE1-214ENST00000435747 KIF26AQ9ULI4 1882 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-214ENST00000435747 CCDC194A0A1B0GVG4 234 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 HEPACAM2A8MVW5 462 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 PATE3B3GLJ2 98 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 J3QKU1 62 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 DCLK1O15075 740 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 ARHGAP6O43182 974 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 ATG13O75143 517 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 MICAL2O94851 1124 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 LRG1P02750 347 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 OR1D2P34982 312 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 PSMC5P62195 406 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 IRX4P78413 519 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 LMAN2Q12907 356 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 HSP90AA2PQ14568 343 aaPredicted RBP11.51□□□□□ -0.57
CPNE1-214ENST00000435747 PKN3Q6P5Z2 889 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 PDZD4Q76G19 769 aaPredicted RBP11.51□□□□□ -0.57
CPNE1-214ENST00000435747 CYP2U1Q7Z449 544 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 POTEDQ86YR6 584 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 ZNF579Q8NAF0 562 aaKnown RBP11.51□□□□□ -0.57
CPNE1-214ENST00000435747 MDM1Q8TC05 714 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 HASPINQ8TF76 798 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 WASF1Q92558 559 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 SH2D3AQ9BRG2 576 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 RNF39Q9H2S5 420 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 SEPT9Q9UHD8 586 aaPredicted RBP11.51□□□□□ -0.57
CPNE1-214ENST00000435747 SPTAN1Q13813 2472 aaKnown RBP11.51□□□□□ -0.57
CPNE1-214ENST00000435747 PTPRQQ9UMZ3 2332 aa11.51□□□□□ -0.57
CPNE1-214ENST00000435747 BTBD18B2RXH4 712 aa11.5□□□□□ -0.57
CPNE1-214ENST00000435747 CHADO15335 359 aa11.5□□□□□ -0.57
CPNE1-214ENST00000435747 MEFVO15553 781 aaPredicted RBP11.5□□□□□ -0.57
CPNE1-214ENST00000435747 XBP1P17861 261 aa11.5□□□□□ -0.57
CPNE1-214ENST00000435747 HOXA11P31270 313 aaPredicted RBP11.5□□□□□ -0.57
CPNE1-214ENST00000435747 MAPK8P45983 427 aa11.5□□□□□ -0.57
CPNE1-214ENST00000435747 CYP4A22Q5TCH4 519 aa11.5□□□□□ -0.57
CPNE1-214ENST00000435747 PIP4P1Q86T03 277 aa11.5□□□□□ -0.57
CPNE1-214ENST00000435747 CAMKK1Q8N5S9 505 aa11.5□□□□□ -0.57
CPNE1-214ENST00000435747 TTC8Q8TAM2 541 aa11.5□□□□□ -0.57
CPNE1-214ENST00000435747 ZSCAN18Q8TBC5 510 aaPredicted RBP11.5□□□□□ -0.57
CPNE1-214ENST00000435747 E2F7Q96AV8 911 aa11.5□□□□□ -0.57
CPNE1-214ENST00000435747 ZSWIM3Q96MP5 696 aa11.5□□□□□ -0.57
CPNE1-214ENST00000435747 DHX33Q9H6R0 707 aaKnown RBP11.5□□□□□ -0.57
CPNE1-214ENST00000435747 IFT122Q9HBG6 1241 aa11.5□□□□□ -0.57
CPNE1-214ENST00000435747 GIT1Q9Y2X7 761 aa11.5□□□□□ -0.57
CPNE1-214ENST00000435747 HES2Q9Y543 173 aa11.5□□□□□ -0.57
CPNE1-214ENST00000435747 TEP1Q99973 2627 aaKnown RBP11.5□□□□□ -0.57
CPNE1-214ENST00000435747 TEX15Q9BXT5 2789 aa11.5□□□□□ -0.57
CPNE1-214ENST00000435747 ATXN7O15265 892 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-214ENST00000435747 CCNT1O60563 726 aaKnown RBP11.49□□□□□ -0.57
CPNE1-214ENST00000435747 P4HBP07237 508 aaKnown RBP11.49□□□□□ -0.57
CPNE1-214ENST00000435747 KRT2P35908 639 aa11.49□□□□□ -0.57
CPNE1-214ENST00000435747 QARSP47897 775 aaKnown RBP11.49□□□□□ -0.57
CPNE1-214ENST00000435747 ELAVL2Q12926 359 aaKnown RBP11.49□□□□□ -0.57
CPNE1-214ENST00000435747 GRIK3Q13003 919 aa11.49□□□□□ -0.57
CPNE1-214ENST00000435747 EPHA7Q15375 998 aa11.49□□□□□ -0.57
CPNE1-214ENST00000435747 PLA2G4FQ68DD2 849 aa11.49□□□□□ -0.57
CPNE1-214ENST00000435747 SRGAP1Q7Z6B7 1085 aa11.49□□□□□ -0.57
CPNE1-214ENST00000435747 C4orf19Q8IY42 314 aa11.49□□□□□ -0.57
CPNE1-214ENST00000435747 HACE1Q8IYU2 909 aa11.49□□□□□ -0.57
CPNE1-214ENST00000435747 MTMR9Q96QG7 549 aa11.49□□□□□ -0.57
CPNE1-214ENST00000435747 HHIPQ96QV1 700 aa11.49□□□□□ -0.57
CPNE1-214ENST00000435747 NAP1L4Q99733 375 aaKnown RBP11.49□□□□□ -0.57
CPNE1-214ENST00000435747 HSD17B14Q9BPX1 270 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms