RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 EPS15L1Q9UBC2 864 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 UBA6A0AVT1 1052 aaPredicted RBP16.47■□□□□ 0.23
NEDD4-202ENST00000435532 GRID2IPA4D2P6 1211 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 RNASEH1O60930 286 aaKnown RBP16.47■□□□□ 0.23
NEDD4-202ENST00000435532 PREPLQ4J6C6 727 aaPredicted RBP16.47■□□□□ 0.23
NEDD4-202ENST00000435532 ZC2HC1CQ53FD0 456 aaPredicted RBP16.47■□□□□ 0.23
NEDD4-202ENST00000435532 THEMIS2Q5TEJ8 643 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 APOBEC3HQ6NTF7 200 aaKnown RBP16.47■□□□□ 0.23
NEDD4-202ENST00000435532 RIOX2Q8IUF8 465 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 SUN2Q9UH99 717 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 TRPV2Q9Y5S1 764 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 KIF3CO14782 793 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 MBL2P11226 248 aaPredicted RBP16.47■□□□□ 0.23
NEDD4-202ENST00000435532 CAPS2Q9BXY5 557 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 THG1LQ9NWX6 298 aaKnown RBP16.47■□□□□ 0.23
NEDD4-202ENST00000435532 PCDHB2Q9Y5E7 798 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 CDH18Q13634 790 aa16.46■□□□□ 0.23
NEDD4-202ENST00000435532 PTPAQ15257 358 aa16.46■□□□□ 0.23
NEDD4-202ENST00000435532 HSPA4LO95757 839 aa16.46■□□□□ 0.23
NEDD4-202ENST00000435532 ARP10275 920 aa16.46■□□□□ 0.23
NEDD4-202ENST00000435532 PTK2BQ14289 1009 aa16.46■□□□□ 0.23
NEDD4-202ENST00000435532 PHLDB3Q6NSJ2 640 aa16.46■□□□□ 0.23
NEDD4-202ENST00000435532 CYB561D2O14569 222 aa16.46■□□□□ 0.23
NEDD4-202ENST00000435532 MAP4P27816 1152 aaKnown RBP16.46■□□□□ 0.23
NEDD4-202ENST00000435532 SSTR3P32745 418 aaPredicted RBP16.46■□□□□ 0.23
NEDD4-202ENST00000435532 RABGAP1LQ5R372 815 aa16.46■□□□□ 0.23
NEDD4-202ENST00000435532 ANKS3Q6ZW76 656 aa16.46■□□□□ 0.23
NEDD4-202ENST00000435532 USP13Q92995 863 aaPredicted RBP16.46■□□□□ 0.23
NEDD4-202ENST00000435532 ELOA2Q8IYF1 753 aaPredicted RBP16.46■□□□□ 0.23
NEDD4-202ENST00000435532 FAM96AQ9H5X1 160 aa16.46■□□□□ 0.23
NEDD4-202ENST00000435532 MROH7Q68CQ1 1323 aa16.46■□□□□ 0.22
NEDD4-202ENST00000435532 H0Y626 953 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 PIK3R2O00459 728 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 COPEO14579 308 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 GARTP22102 1010 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 GTF2H1P32780 548 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 IKBKEQ14164 716 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 P3H1Q32P28 736 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 ZNF410Q86VK4 478 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 TUBB6Q9BUF5 446 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 RIOX1Q9H6W3 641 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 SETD4Q9NVD3 440 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 LIMA1Q9UHB6 759 aaKnown RBP16.45■□□□□ 0.22
NEDD4-202ENST00000435532 SLC25A13Q9UJS0 675 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 PCK1P35558 622 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 EIF3EP60228 445 aaKnown RBP16.45■□□□□ 0.22
NEDD4-202ENST00000435532 FBXO32Q969P5 355 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 DBR1Q9UK59 544 aaKnown RBP16.45■□□□□ 0.22
NEDD4-202ENST00000435532 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.45■□□□□ 0.22
NEDD4-202ENST00000435532 RSPH10B2B2RC85 870 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 RSPH10BP0C881 870 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 GPD1P21695 349 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 ZNF177Q13360 481 aaPredicted RBP16.45■□□□□ 0.22
NEDD4-202ENST00000435532 ORC6Q9Y5N6 252 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 ARMC6Q6NXE6 501 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 FGD4Q96M96 766 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 CAPN11Q9UMQ6 739 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 KRT14P02533 472 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 ATP1A2P50993 1020 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 KPNA1P52294 538 aaPredicted RBP16.45■□□□□ 0.22
NEDD4-202ENST00000435532 CATSPERGQ6ZRH7 1159 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 HERC6Q8IVU3 1022 aa16.45■□□□□ 0.22
NEDD4-202ENST00000435532 SUDS3Q9H7L9 328 aaPredicted RBP16.45■□□□□ 0.22
NEDD4-202ENST00000435532 GLTPD2A6NH11 291 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 CFAP99D6REC4 459 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 GNGT2O14610 69 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 XYLBO75191 536 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 COPS2P61201 443 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 LY6KQ17RY6 165 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 APBA2Q99767 749 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 SENP2Q9HC62 589 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 TBC1D12O60347 775 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 NCAM1P13591 858 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 AKT1P31749 480 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 ATICP31939 592 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 NFE2Q16621 373 aaPredicted RBP16.44■□□□□ 0.22
NEDD4-202ENST00000435532 ADGRF2Q8IZF7 708 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 SENP6Q9GZR1 1112 aaPredicted RBP16.44■□□□□ 0.22
NEDD4-202ENST00000435532 STN1Q9H668 368 aaKnown RBP16.44■□□□□ 0.22
NEDD4-202ENST00000435532 TTLL13PA6NNM8 815 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 SMIM24O75264 130 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 CHGBP05060 677 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 RNF217Q8TC41 542 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 GIPC2Q8TF65 315 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 TMEM60Q9H2L4 133 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 TBK1Q9UHD2 729 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 PYCARDQ9ULZ3 195 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 SLC30A1Q9Y6M5 507 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 MTSS1O43312 755 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 ZNF500O60304 480 aaPredicted RBP16.44■□□□□ 0.22
NEDD4-202ENST00000435532 AP1G2O75843 785 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 MTA1Q13330 715 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 Q9H521 79 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 RABEP2Q9H5N1 569 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 AFF4Q9UHB7 1163 aaKnown RBP16.44■□□□□ 0.22
NEDD4-202ENST00000435532 CFAP69A5D8W1 941 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 INSRRP14616 1297 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 IFNAR2P48551 515 aa16.44■□□□□ 0.22
NEDD4-202ENST00000435532 FAM187AA6NFU0 413 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 TXNDC9O14530 226 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms