RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SAP30BPQ9UHR5 308 aaKnown RBP7.89□□□□□ -1.15
CPSF6-202ENST00000435070 BAZ2AQ9UIF9 1905 aaKnown RBP7.89□□□□□ -1.15
CPSF6-202ENST00000435070 KITP10721 976 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 SH3D19Q5HYK7 790 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 KRT28Q7Z3Y7 464 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 ZNF653Q96CK0 615 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 TMEM47Q9BQJ4 181 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 TMEM120AQ9BXJ8 343 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 MEGF6O75095 1541 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 MEI4A8MW99 385 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 FCHO1O14526 889 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 PABPC4LP0CB38 370 aaKnown RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 MAGEA4P43358 317 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 AP2B1P63010 937 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 NCOA4Q13772 614 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 IYDQ6PHW0 289 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 NMUR2Q9GZQ4 415 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 TLE6Q9H808 572 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 SAR1AQ9NR31 198 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 R3HDM2Q9Y2K5 976 aaKnown RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 ADGRA3Q8IWK6 1321 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 MIF4GDA9UHW6 222 aaKnown RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 BANF1O75531 89 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 CCDC166P0CW27 439 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 CYP11B2P19099 503 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 ITIH2P19823 946 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 NOP14P78316 857 aaKnown RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 CYP4A11Q02928 519 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 ASPHQ12797 758 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 C2CD6Q53TS8 623 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 KLC3Q6P597 504 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 ANKMY2Q8IV38 441 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 ZBTB8BQ8NAP8 495 aaPredicted RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 STKLD1Q8NE28 680 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 GSTCDQ8NEC7 633 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 SLC30A5Q8TAD4 765 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 ZNF384Q8TF68 577 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 MTMR9Q96QG7 549 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 CRNKL1Q9BZJ0 848 aaKnown RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 FAF1Q9UNN5 650 aaPredicted RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 SSX2IPQ9Y2D8 614 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 TRIM43BA6NCK2 446 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 TRPA1O75762 1119 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 VIL1P09327 827 aaKnown RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 ALAS1P13196 640 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 RFC4P35249 363 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 AQP4P55087 323 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 CYLC2Q14093 348 aaPredicted RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 GRM4Q14833 912 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 KNOP1Q1ED39 458 aaKnown RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 ZNF554Q86TJ5 538 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 GCNAQ96QF7 691 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 BRIP1Q9BX63 1249 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 KLHL4Q9C0H6 718 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 LIN28AQ9H9Z2 209 aaKnown RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 BTBD7Q9P203 1132 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 MYO3BQ8WXR4 1341 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 NOL3O60936 208 aaKnown RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 MYL2P10916 166 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 EIF6P56537 245 aaKnown RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 PSMC6P62333 389 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 CHRNDQ07001 517 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 STAT4Q14765 748 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 TRIP10Q15642 601 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 RBM15BQ8NDT2 890 aaKnown RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 OR6Y1Q8NGX8 325 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 CCDC110Q8TBZ0 833 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 PANX3Q96QZ0 392 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 HERPUD2Q9BSE4 406 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 MAK16Q9BXY0 300 aaKnown RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 SLC17A7Q9P2U7 560 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 SH3GLB1Q9Y371 365 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 FAM237BA0A1B0GVD1 139 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 JAM2P57087 298 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 TRIM28Q13263 835 aaKnown RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 PCNX4Q63HM2 1172 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 FRMD5Q7Z6J6 570 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 SLF2Q8IX21 1173 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 MPHOSPH6Q99547 160 aaKnown RBP7.88□□□□□ -1.15
CPSF6-202ENST00000435070 APPL1Q9UKG1 709 aa7.88□□□□□ -1.15
CPSF6-202ENST00000435070 SRCAPQ6ZRS2 3230 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 ZSCAN5DPP0CG00 497 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 PRDX5P30044 214 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 SERPINB6P35237 376 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 ARHGAP24Q8N264 748 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 STK33Q9BYT3 514 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 STK32BQ9NY57 414 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 WHRNQ9P202 907 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 PDE5AO76074 875 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 CDK4P11802 303 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 RPL13P26373 211 aaKnown RBP7.87□□□□□ -1.15
CPSF6-202ENST00000435070 PCSK6P29122 969 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 PSMD7P51665 324 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 ARL4CP56559 192 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 RASA2Q15283 850 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 CBWD6Q4V339 395 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 CBWD3Q5JTY5 395 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 CBWD5Q5RIA9 395 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 RHOT2Q8IXI1 618 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 FAM186BQ8IYM0 893 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms