RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 PARD3BQ8TEW8 1205 aa6.4□□□□□ -1.38
PTP4A1P3-201ENST00000433661 SCAMP4Q969E2 229 aa6.4□□□□□ -1.38
PTP4A1P3-201ENST00000433661 TRIM43Q96BQ3 446 aaPredicted RBP6.4□□□□□ -1.38
PTP4A1P3-201ENST00000433661 RIPOR3Q96MK2 946 aa6.4□□□□□ -1.38
PTP4A1P3-201ENST00000433661 TBCBQ99426 244 aa6.4□□□□□ -1.38
PTP4A1P3-201ENST00000433661 DPYSL5Q9BPU6 564 aa6.4□□□□□ -1.38
PTP4A1P3-201ENST00000433661 PLA2G12BQ9BX93 195 aa6.4□□□□□ -1.38
PTP4A1P3-201ENST00000433661 PACSIN1Q9BY11 444 aa6.4□□□□□ -1.38
PTP4A1P3-201ENST00000433661 SMURF2Q9HAU4 748 aa6.4□□□□□ -1.38
PTP4A1P3-201ENST00000433661 ZNF287Q9HBT7 754 aa6.4□□□□□ -1.38
PTP4A1P3-201ENST00000433661 STAP2Q9UGK3 403 aa6.4□□□□□ -1.38
PTP4A1P3-201ENST00000433661 PCDHA6Q9UN73 950 aa6.4□□□□□ -1.38
PTP4A1P3-201ENST00000433661 DMTF1Q9Y222 760 aa6.4□□□□□ -1.38
PTP4A1P3-201ENST00000433661 TRIM13O60858 407 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 FGF18O76093 207 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 IPO13O94829 963 aaKnown RBP6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 POMCP01189 267 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 C8AP07357 584 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 SBK3P0C264 359 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 MGAT1P26572 445 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 HTRA4P83105 476 aaPredicted RBP6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 VMACQ2NL98 169 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 FAM83BQ5T0W9 1011 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 SESTD1Q86VW0 696 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 SH2D3CQ8N5H7 860 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 AOPEPQ8N6M6 819 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 ACRBPQ8NEB7 543 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 OR6B3Q8NGW1 331 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 ARL8AQ96BM9 186 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 MYOCQ99972 504 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 C1orf43Q9BWL3 253 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 APOL5Q9BWW9 433 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 BRIP1Q9BX63 1249 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 SIK2Q9H0K1 926 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 BRD9Q9H8M2 597 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 PNPLA8Q9NP80 782 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 STK32BQ9NY57 414 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 COL20A1Q9P218 1284 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 NCDNQ9UBB6 729 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 OGDHLQ9ULD0 1010 aa6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 THOC2Q8NI27 1593 aaKnown RBP6.39□□□□□ -1.39
PTP4A1P3-201ENST00000433661 A0A1W2PPC4 97 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 STC2O76061 302 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 AHSGP02765 367 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 MYL3P08590 195 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 KITP10721 976 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 CFPP27918 469 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 TXKP42681 527 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 SUMO3P55854 103 aaPredicted RBP6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 DHX8Q14562 1220 aaKnown RBP6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 UBXN2BQ14CS0 331 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 CSRP2Q16527 193 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 C10orf62Q5T681 223 aaPredicted RBP6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 ANKS6Q68DC2 871 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 ERAP2Q6P179 960 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 ZNF529Q6P280 563 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 FBXO18Q8NFZ0 1043 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 MAML1Q92585 1016 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 KCNC2Q96PR1 638 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 ZNF518BQ9C0D4 1074 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 C12orf65Q9H3J6 166 aaKnown RBP6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 PLA2G3Q9NZ20 509 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 FNIP2Q9P278 1114 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 RUVBL1Q9Y265 456 aaKnown RBP6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 DAAM1Q9Y4D1 1078 aa6.38□□□□□ -1.39
PTP4A1P3-201ENST00000433661 A0A087WWL8 130 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 MBD3L4A6NDZ8 208 aaPredicted RBP6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 MBD3L3A6NE82 208 aaPredicted RBP6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 DBX1A6NMT0 343 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 CLCA1A8K7I4 914 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 PLATP00750 562 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 GJB1P08034 283 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 BRAFP15056 766 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 TYRP1P17643 537 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 HDCP19113 662 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 TNFSF4P23510 183 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 POU6F2P78424 691 aaPredicted RBP6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 GRM7Q14831 915 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 GRAMD1BQ3KR37 738 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 ATXN7L2Q5T6C5 722 aaPredicted RBP6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 ZNF783Q6ZMS7 281 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 PPP1R32Q7Z5V6 425 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 MICU3Q86XE3 530 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 LRRC56Q8IYG6 542 aaPredicted RBP6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 ZSCAN18Q8TBC5 510 aaPredicted RBP6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 ST8SIA2Q92186 375 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 SSBP3Q9BWW4 388 aaPredicted RBP6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 WDR12Q9GZL7 423 aaKnown RBP6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 SERHLQ9NQF3 203 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 CPNE7Q9UBL6 633 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 PLEKHM1Q9Y4G2 1056 aa6.37□□□□□ -1.39
PTP4A1P3-201ENST00000433661 TCRBV7S2A1N4TA0A589 114 aa6.36□□□□□ -1.39
PTP4A1P3-201ENST00000433661 PRR5-ARHGAP8B1AHC4 643 aa6.36□□□□□ -1.39
PTP4A1P3-201ENST00000433661 DNAJB5O75953 348 aa6.36□□□□□ -1.39
PTP4A1P3-201ENST00000433661 GNAT2P19087 354 aa6.36□□□□□ -1.39
PTP4A1P3-201ENST00000433661 STT3AP46977 705 aa6.36□□□□□ -1.39
PTP4A1P3-201ENST00000433661 WNT3P56703 355 aa6.36□□□□□ -1.39
PTP4A1P3-201ENST00000433661 MXRA7P84157 204 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms