RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.47■■■□□ 2.15
TMEM248-205ENST00000433271 ARHGEF19Q8IW93 802 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 TNS4Q8IZW8 715 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 TMEM130Q8N3G9 435 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 NLRC4Q9NPP4 1024 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 KANSL3Q9P2N6 904 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 DNAJC12Q9UKB3 198 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 ANO9A1A5B4 782 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 KRT9P35527 623 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 NOMO2Q5JPE7 1267 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 C9orf57Q5W0N0 161 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 TC2NQ8N9U0 490 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 BAP1Q92560 729 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 DPF3Q92784 378 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 TATDN2Q93075 761 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 FAM81BQ96LP2 452 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 APOBEC3GQ9HC16 384 aaKnown RBP28.47■■■□□ 2.15
TMEM248-205ENST00000433271 PCDH10Q9P2E7 1040 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 STAU1O95793 577 aaKnown RBP28.46■■■□□ 2.15
TMEM248-205ENST00000433271 POMCP01189 267 aa28.46■■■□□ 2.15
TMEM248-205ENST00000433271 LRPAP1P30533 357 aa28.46■■■□□ 2.15
TMEM248-205ENST00000433271 ZNF699Q32M78 642 aa28.46■■■□□ 2.15
TMEM248-205ENST00000433271 SPOPLQ6IQ16 392 aa28.46■■■□□ 2.15
TMEM248-205ENST00000433271 C16orf59Q7L2K0 433 aa28.46■■■□□ 2.15
TMEM248-205ENST00000433271 RRAGAQ7L523 313 aa28.46■■■□□ 2.15
TMEM248-205ENST00000433271 ABI1Q8IZP0 508 aa28.46■■■□□ 2.15
TMEM248-205ENST00000433271 PPM1KQ8N3J5 372 aa28.46■■■□□ 2.15
TMEM248-205ENST00000433271 URGCPQ8TCY9 931 aa28.46■■■□□ 2.15
TMEM248-205ENST00000433271 RSPH1Q8WYR4 309 aa28.46■■■□□ 2.15
TMEM248-205ENST00000433271 VRTNQ9H8Y1 702 aa28.46■■■□□ 2.15
TMEM248-205ENST00000433271 PIRO00625 290 aa28.45■■■□□ 2.14
TMEM248-205ENST00000433271 GCNT1Q02742 428 aa28.45■■■□□ 2.14
TMEM248-205ENST00000433271 ENOSF1Q7L5Y1 443 aa28.45■■■□□ 2.14
TMEM248-205ENST00000433271 LRRC52Q8N7C0 313 aa28.45■■■□□ 2.14
TMEM248-205ENST00000433271 ELMO3Q96BJ8 720 aa28.45■■■□□ 2.14
TMEM248-205ENST00000433271 HPDLQ96IR7 371 aa28.45■■■□□ 2.14
TMEM248-205ENST00000433271 STK33Q9BYT3 514 aa28.45■■■□□ 2.14
TMEM248-205ENST00000433271 GOLGA2P5Q9HBQ8 144 aa28.45■■■□□ 2.14
TMEM248-205ENST00000433271 AJAP1Q9UKB5 411 aaPredicted RBP28.45■■■□□ 2.14
TMEM248-205ENST00000433271 NUB1Q9Y5A7 615 aa28.45■■■□□ 2.14
TMEM248-205ENST00000433271 LTBP2Q14767 1821 aa28.45■■■□□ 2.14
TMEM248-205ENST00000433271 SYN1P17600 705 aa28.44■■■□□ 2.14
TMEM248-205ENST00000433271 GOLGA8FQ08AF8 430 aa28.44■■■□□ 2.14
TMEM248-205ENST00000433271 GOLGA8DPQ0D2H9 430 aa28.44■■■□□ 2.14
TMEM248-205ENST00000433271 MYO1EQ12965 1108 aa28.44■■■□□ 2.14
TMEM248-205ENST00000433271 ARID5BQ14865 1188 aa28.44■■■□□ 2.14
TMEM248-205ENST00000433271 OR8K1Q8NGG5 319 aa28.44■■■□□ 2.14
TMEM248-205ENST00000433271 FAXDC2Q96IV6 333 aa28.44■■■□□ 2.14
TMEM248-205ENST00000433271 NUCKS1Q9H1E3 243 aaKnown RBP28.44■■■□□ 2.14
TMEM248-205ENST00000433271 MYO6Q9UM54 1294 aa28.44■■■□□ 2.14
TMEM248-205ENST00000433271 AMHP03971 560 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 RPL9P32969 192 aaKnown RBP28.43■■■□□ 2.14
TMEM248-205ENST00000433271 MFAP3P55082 362 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 JAM2P57087 298 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 RAPGEF1Q13905 1077 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 CASD1Q96PB1 797 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 SPAG5Q96R06 1193 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 PANX2Q96RD6 677 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 DNAJC7Q99615 494 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 ABHD10Q9NUJ1 306 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 ZMYND8Q9ULU4 1186 aaPredicted RBP28.43■■■□□ 2.14
TMEM248-205ENST00000433271 CLSTN1O94985 981 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 FGBP02675 491 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 TBXAS1P24557 533 aaPredicted RBP28.43■■■□□ 2.14
TMEM248-205ENST00000433271 PNPLA4P41247 253 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 WDR5P61964 334 aaKnown RBP28.43■■■□□ 2.14
TMEM248-205ENST00000433271 TUSC3Q13454 348 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 TOP1MTQ969P6 601 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 KREMEN1Q96MU8 473 aa28.43■■■□□ 2.14
TMEM248-205ENST00000433271 PPEF2O14830 753 aa28.42■■■□□ 2.14
TMEM248-205ENST00000433271 CUL2Q13617 745 aa28.42■■■□□ 2.14
TMEM248-205ENST00000433271 DRAP1Q14919 205 aaPredicted RBP28.42■■■□□ 2.14
TMEM248-205ENST00000433271 WDR72Q3MJ13 1102 aa28.42■■■□□ 2.14
TMEM248-205ENST00000433271 ZNF667Q5HYK9 610 aa28.42■■■□□ 2.14
TMEM248-205ENST00000433271 PDXDC1Q6P996 788 aa28.42■■■□□ 2.14
TMEM248-205ENST00000433271 OTOP2Q7RTS6 562 aa28.42■■■□□ 2.14
TMEM248-205ENST00000433271 JAKMIP2Q96AA8 810 aa28.42■■■□□ 2.14
TMEM248-205ENST00000433271 DDX27Q96GQ7 796 aaKnown RBP28.42■■■□□ 2.14
TMEM248-205ENST00000433271 NIF3L1Q9GZT8 377 aa28.42■■■□□ 2.14
TMEM248-205ENST00000433271 TBC1D13Q9NVG8 400 aa28.42■■■□□ 2.14
TMEM248-205ENST00000433271 LRRC53A6NM62 1247 aa28.41■■■□□ 2.14
TMEM248-205ENST00000433271 ARHGAP44Q17R89 818 aa28.41■■■□□ 2.14
TMEM248-205ENST00000433271 TSR1Q2NL82 804 aaKnown RBP28.41■■■□□ 2.14
TMEM248-205ENST00000433271 ZNF365Q70YC5 407 aa28.41■■■□□ 2.14
TMEM248-205ENST00000433271 SYN2Q92777 582 aaPredicted RBP28.41■■■□□ 2.14
TMEM248-205ENST00000433271 KAT5Q92993 513 aa28.41■■■□□ 2.14
TMEM248-205ENST00000433271 ZNF560Q96MR9 790 aa28.41■■■□□ 2.14
TMEM248-205ENST00000433271 UROC1Q96N76 676 aa28.41■■■□□ 2.14
TMEM248-205ENST00000433271 LBHD1Q9BQE6 289 aaPredicted RBP28.41■■■□□ 2.14
TMEM248-205ENST00000433271 F8VZ95 297 aa28.4■■■□□ 2.14
TMEM248-205ENST00000433271 UPP2O95045 317 aa28.4■■■□□ 2.14
TMEM248-205ENST00000433271 P4HA1P13674 534 aa28.4■■■□□ 2.14
TMEM248-205ENST00000433271 EPHB4P54760 987 aa28.4■■■□□ 2.14
TMEM248-205ENST00000433271 PSRC1Q6PGN9 363 aaPredicted RBP28.4■■■□□ 2.14
TMEM248-205ENST00000433271 LRRC8AQ8IWT6 810 aa28.4■■■□□ 2.14
TMEM248-205ENST00000433271 NXF1Q9UBU9 619 aaKnown RBP28.4■■■□□ 2.14
TMEM248-205ENST00000433271 TDRD15B5MCY1 1934 aaKnown RBP28.4■■■□□ 2.14
TMEM248-205ENST00000433271 HNRNPH3P31942 346 aaKnown RBP28.4■■■□□ 2.14
TMEM248-205ENST00000433271 CLCNKBP51801 687 aa28.4■■■□□ 2.14
TMEM248-205ENST00000433271 RNASELQ05823 741 aaKnown RBP28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms