RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 SAPCD2Q86UD0 394 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 CPNE8Q86YQ8 564 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 PASD1Q8IV76 773 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 KLHL7Q8IXQ5 586 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 KIAA0319LQ8IZA0 1049 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 TMEM130Q8N3G9 435 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 ST7Q9NRC1 585 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 UVRAGQ9P2Y5 699 aa20.92■□□□□ 0.94
VRK2-205ENST00000432057 A6NJR5 290 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 THAP12O43422 761 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 NFICP08651 508 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 ZNF865P0CJ78 1059 aaPredicted RBP20.91■□□□□ 0.94
VRK2-205ENST00000432057 CD58P19256 250 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 COMTP21964 271 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 MARCKSL1P49006 195 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 ZNF132P52740 706 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 CENPCQ03188 943 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 CASP8Q14790 479 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 SGSM1Q2NKQ1 1148 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 C17orf99Q6UX52 265 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 TLK2Q86UE8 772 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 IFNL1Q8IU54 200 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 MCOLN2Q8IZK6 566 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 ALG3Q92685 438 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 CYFIP2Q96F07 1278 aa20.91■□□□□ 0.94
VRK2-205ENST00000432057 PDCD11Q14690 1871 aaKnown RBP20.91■□□□□ 0.94
VRK2-205ENST00000432057 LACTBL1A8MY62 500 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 TSPAN1O60635 241 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 HEXIM1O94992 359 aaKnown RBP20.9■□□□□ 0.94
VRK2-205ENST00000432057 CYP2B6P20813 491 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 TNNT3P45378 269 aaPredicted RBP20.9■□□□□ 0.94
VRK2-205ENST00000432057 USP6NLQ92738 828 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 KRT35Q92764 455 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 XYLT2Q9H1B5 865 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 CARD9Q9H257 536 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 RAD51CO43502 376 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 F2P00734 622 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 SLC10A3P09131 477 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 SMIM10L2AP0DMW4 78 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 SMIM10L2BP0DMW5 78 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 ITGA4P13612 1032 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 FGFR4P22455 802 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 NSFP46459 744 aaKnown RBP20.9■□□□□ 0.94
VRK2-205ENST00000432057 NOMO3P69849 1222 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 TMEM62Q0P6H9 643 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 ZNF211Q13398 564 aaPredicted RBP20.9■□□□□ 0.94
VRK2-205ENST00000432057 C2CD6Q53TS8 623 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 LLGL2Q6P1M3 1020 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 PHLDB2Q86SQ0 1253 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 KAT2BQ92831 832 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 RNPC3Q96LT9 517 aaKnown RBP20.9■□□□□ 0.94
VRK2-205ENST00000432057 ZSWIM1Q9BR11 485 aa20.9■□□□□ 0.94
VRK2-205ENST00000432057 FAM49AQ9H0Q0 323 aaPredicted RBP20.9■□□□□ 0.94
VRK2-205ENST00000432057 ZSCAN5CA6NGD5 496 aaPredicted RBP20.89■□□□□ 0.93
VRK2-205ENST00000432057 MIF4GDA9UHW6 222 aaKnown RBP20.89■□□□□ 0.93
VRK2-205ENST00000432057 KRIT1O00522 736 aa20.89■□□□□ 0.93
VRK2-205ENST00000432057 ERLIN2O94905 339 aa20.89■□□□□ 0.93
VRK2-205ENST00000432057 FGGP02679 453 aa20.89■□□□□ 0.93
VRK2-205ENST00000432057 GLI1P08151 1106 aa20.89■□□□□ 0.93
VRK2-205ENST00000432057 KIZQ2M2Z5 673 aa20.89■□□□□ 0.93
VRK2-205ENST00000432057 JADE1Q6IE81 842 aa20.89■□□□□ 0.93
VRK2-205ENST00000432057 TRIM72Q6ZMU5 477 aa20.89■□□□□ 0.93
VRK2-205ENST00000432057 MON1BQ7L1V2 547 aa20.89■□□□□ 0.93
VRK2-205ENST00000432057 AENQ8WTP8 325 aaKnown RBP20.89■□□□□ 0.93
VRK2-205ENST00000432057 GDAP1L1Q96MZ0 367 aa20.89■□□□□ 0.93
VRK2-205ENST00000432057 RPS6KC1Q96S38 1066 aa20.89■□□□□ 0.93
VRK2-205ENST00000432057 UBXN6Q9BZV1 441 aa20.89■□□□□ 0.93
VRK2-205ENST00000432057 CISHQ9NSE2 258 aa20.89■□□□□ 0.93
VRK2-205ENST00000432057 SIX4Q9UIU6 781 aa20.89■□□□□ 0.93
VRK2-205ENST00000432057 TTC7AQ9ULT0 858 aaPredicted RBP20.89■□□□□ 0.93
VRK2-205ENST00000432057 POLIQ9UNA4 740 aa20.89■□□□□ 0.93
VRK2-205ENST00000432057 RRN3P2A6NIE6 340 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 KRT19P08727 400 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 RRM1P23921 792 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 ASPAP45381 313 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 ZNF410Q86VK4 478 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 UBL4BQ8N7F7 174 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 AVENQ9NQS1 362 aaPredicted RBP20.88■□□□□ 0.93
VRK2-205ENST00000432057 MROH7Q68CQ1 1323 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 WEE2P0C1S8 567 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 TNFRSF8P28908 595 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 GUCY2DQ02846 1103 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 IRF5Q13568 498 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 AADACL2Q6P093 401 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 C1orf127Q8N9H9 656 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 CD101Q93033 1021 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 ZBTB9Q96C00 473 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 TRIM11Q96F44 468 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 C11orf70Q9BRQ4 267 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 DDX47Q9H0S4 455 aaKnown RBP20.88■□□□□ 0.93
VRK2-205ENST00000432057 ANAPC7Q9UJX3 599 aa20.88■□□□□ 0.93
VRK2-205ENST00000432057 ESYT3A0FGR9 886 aa20.87■□□□□ 0.93
VRK2-205ENST00000432057 CCDC188H7C350 402 aa20.87■□□□□ 0.93
VRK2-205ENST00000432057 SPOPO43791 374 aa20.87■□□□□ 0.93
VRK2-205ENST00000432057 MYBL1P10243 752 aa20.87■□□□□ 0.93
VRK2-205ENST00000432057 RGS2P41220 211 aa20.87■□□□□ 0.93
VRK2-205ENST00000432057 SMC1AQ14683 1233 aaKnown RBP20.87■□□□□ 0.93
VRK2-205ENST00000432057 ZNF394Q53GI3 561 aa20.87■□□□□ 0.93
VRK2-205ENST00000432057 ZNF606Q8WXB4 792 aa20.87■□□□□ 0.93
VRK2-205ENST00000432057 TRIM7Q9C029 511 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms