RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 SPATA31D3P0C874 917 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 FDPSP14324 419 aaKnown RBP9.11□□□□□ -0.95
CDH13-203ENST00000431540 KCNE1P15382 129 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 WEE1P30291 646 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 OR1D2P34982 312 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 LMNB2Q03252 620 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 STK3Q13188 491 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 MRPL58Q14197 206 aaKnown RBP9.11□□□□□ -0.95
CDH13-203ENST00000431540 SAFBQ15424 915 aaKnown RBP eCLIP9.11□□□□□ -0.95
CDH13-203ENST00000431540 HAUS3Q68CZ6 603 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 PADI6Q6TGC4 694 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 PARM1Q6UWI2 310 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 SPATA31D4Q6ZUB0 917 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 GET4Q7L5D6 327 aaPredicted RBP9.11□□□□□ -0.95
CDH13-203ENST00000431540 MAML2Q8IZL2 1156 aaPredicted RBP9.11□□□□□ -0.95
CDH13-203ENST00000431540 RMDN1Q96DB5 314 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 PPP1R10Q96QC0 940 aaKnown RBP9.11□□□□□ -0.95
CDH13-203ENST00000431540 RTKNQ9BST9 563 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 RAB34Q9BZG1 259 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 FOXP1Q9H334 677 aaPredicted RBP9.11□□□□□ -0.95
CDH13-203ENST00000431540 PDZD7Q9H5P4 517 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 LTB4R2Q9NPC1 389 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 DNMT3BQ9UBC3 853 aaKnown RBP9.11□□□□□ -0.95
CDH13-203ENST00000431540 HSFX1Q9UBD0 423 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 ZMYM5Q9UJ78 669 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 TPCN1Q9ULQ1 816 aa9.11□□□□□ -0.95
CDH13-203ENST00000431540 ZNF638Q14966 1978 aaKnown RBP9.1□□□□□ -0.95
CDH13-203ENST00000431540 SOBPA7XYQ1 873 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 BTBD18B2RXH4 712 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 LAD1O00515 517 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 B4GALT5O43286 388 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 RECQL4O94761 1208 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 B3GAT3O94766 335 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 KIF4AO95239 1232 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 PAPSS2O95340 614 aaPredicted RBP9.1□□□□□ -0.95
CDH13-203ENST00000431540 CTDNEP1O95476 244 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 PRKCBP05771 671 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 DCNP07585 359 aaKnown RBP9.1□□□□□ -0.95
CDH13-203ENST00000431540 SNRPBP14678 240 aaKnown RBP9.1□□□□□ -0.95
CDH13-203ENST00000431540 LORP23490 312 aaPredicted RBP9.1□□□□□ -0.95
CDH13-203ENST00000431540 HOXA6P31267 233 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 ELF1P32519 619 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 GRM5P41594 1212 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 YARSP54577 528 aaKnown RBP9.1□□□□□ -0.95
CDH13-203ENST00000431540 SNW1Q13573 536 aaKnown RBP9.1□□□□□ -0.95
CDH13-203ENST00000431540 KYAT1Q16773 422 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 PRSS55Q6UWB4 352 aaPredicted RBP9.1□□□□□ -0.95
CDH13-203ENST00000431540 CEP57Q86XR8 500 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 NPAS3Q8IXF0 933 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 DEPTORQ8TB45 409 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 PIGOQ8TEQ8 1089 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 DEPDC1BQ8WUY9 529 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 GTF3C6Q969F1 213 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 LLPHQ9BRT6 129 aaKnown RBP9.1□□□□□ -0.95
CDH13-203ENST00000431540 APOL6Q9BWW8 343 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 PLEKHA5Q9HAU0 1116 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 ZFP14Q9HCL3 533 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 PRMT8Q9NR22 394 aaPredicted RBP9.1□□□□□ -0.95
CDH13-203ENST00000431540 SPATA6Q9NWH7 488 aaPredicted RBP9.1□□□□□ -0.95
CDH13-203ENST00000431540 SNTG2Q9NY99 539 aa9.1□□□□□ -0.95
CDH13-203ENST00000431540 MRPS23Q9Y3D9 190 aaKnown RBP9.1□□□□□ -0.95
CDH13-203ENST00000431540 GREB1Q4ZG55 1949 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 NUP210Q8TEM1 1887 aaPredicted RBP9.09□□□□□ -0.95
CDH13-203ENST00000431540 SMIM28A0A1B0GU29 152 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 ARHGEF35A5YM69 484 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 FGF19O95750 216 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 LRG1P02750 347 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 PSMC3P17980 439 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 RPL17P18621 184 aaKnown RBP9.09□□□□□ -0.95
CDH13-203ENST00000431540 ABCD1P33897 745 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 EPHA5P54756 1037 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 NR5A1Q13285 461 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 FZD5Q13467 585 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 EARS2Q5JPH6 523 aaKnown RBP9.09□□□□□ -0.95
CDH13-203ENST00000431540 CYP4A22Q5TCH4 519 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 ATF7IP2Q5U623 682 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 IQCEQ6IPM2 695 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 MAP4K3Q8IVH8 894 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 DIS3L2Q8IYB7 885 aaKnown RBP9.09□□□□□ -0.95
CDH13-203ENST00000431540 KIAA2013Q8IYS2 634 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 ELMOD1Q8N336 334 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 SYNPOQ8N3V7 929 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 ZSCAN1Q8NBB4 408 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 APPL2Q8NEU8 664 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 SLC7A14Q8TBB6 771 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 FEZF2Q8TBJ5 459 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 DDX1Q92499 740 aaKnown RBP9.09□□□□□ -0.95
CDH13-203ENST00000431540 PAAF1Q9BRP4 392 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 RPP25Q9BUL9 199 aaKnown RBP9.09□□□□□ -0.95
CDH13-203ENST00000431540 TRMT61BQ9BVS5 477 aaKnown RBP9.09□□□□□ -0.95
CDH13-203ENST00000431540 CCDC94Q9BW85 323 aaPredicted RBP9.09□□□□□ -0.95
CDH13-203ENST00000431540 CHRDQ9H2X0 955 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 PTPRHQ9HD43 1115 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 KCND2Q9NZV8 630 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 KLK14Q9P0G3 267 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 ASB3Q9Y575 518 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 CDY1Q9Y6F8 540 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 R4GN57 208 aa9.09□□□□□ -0.95
CDH13-203ENST00000431540 ACACBO00763 2458 aa9.08□□□□□ -0.96
CDH13-203ENST00000431540 TICRRQ7Z2Z1 1910 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms