RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 IL10RAQ13651 578 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 NOMO1Q15155 1222 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 TARBP2Q15633 366 aaKnown RBP4.89□□□□□ -1.63
HMGB3-203ENST00000430118 PRSS36Q5K4E3 855 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 ADGRF1Q5T601 910 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 TMED8Q6PL24 325 aaPredicted RBP4.89□□□□□ -1.63
HMGB3-203ENST00000430118 NFXL1Q6ZNB6 911 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 ZNF354CQ86Y25 554 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 SNX33Q8WV41 574 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 ARL8AQ96BM9 186 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 MRGPRX4Q96LA9 322 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 SOX7Q9BT81 388 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 BCO1Q9HAY6 547 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 ATP6V0A4Q9HBG4 840 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 KIAA1586Q9HCI6 787 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 PNPLA8Q9NP80 782 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 KCND1Q9NSA2 647 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 MBNL3Q9NUK0 354 aaKnown RBP4.89□□□□□ -1.63
HMGB3-203ENST00000430118 LMBRD1Q9NUN5 540 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 SAE1Q9UBE0 346 aaPredicted RBP4.89□□□□□ -1.63
HMGB3-203ENST00000430118 PLEKHG2Q9H7P9 1386 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 COL24A1Q17RW2 1714 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 USP6P35125 1406 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 CPSF1Q10570 1443 aaKnown RBP4.89□□□□□ -1.63
HMGB3-203ENST00000430118 PPIP5K1Q6PFW1 1433 aa4.89□□□□□ -1.63
HMGB3-203ENST00000430118 A0A0G2JNJ9 132 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 A0A1W2PPL8 197 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 MYO1FO00160 1098 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 TLR5O60602 858 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 NBNO60934 754 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 LY86O95711 162 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 GASTP01350 101 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 RNASE1P07998 156 aaKnown RBP4.88□□□□□ -1.63
HMGB3-203ENST00000430118 CYP2C8P10632 490 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 TYRP14679 529 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 TRHRP34981 398 aaPredicted RBP4.88□□□□□ -1.63
HMGB3-203ENST00000430118 PPM1AP35813 382 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 STAT5AP42229 794 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 SARSP49591 514 aaKnown RBP4.88□□□□□ -1.63
HMGB3-203ENST00000430118 FSTL1Q12841 308 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 SEPT2Q15019 361 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 ZNF827Q17R98 1081 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 DACT2Q5SW24 774 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 ZFYVE27Q5T4F4 411 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 CCDC70Q6NSX1 233 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 TLDC1Q6P9B6 456 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 GPR155Q7Z3F1 870 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 KCNH5Q8NCM2 988 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 OR2I1PQ8NGU4 316 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 PLBD2Q8NHP8 589 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 IL31RAQ8NI17 732 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 ZNF480Q8WV37 535 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 DPF2Q92785 391 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 KAT5Q92993 513 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 SLC35A4Q96G79 324 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 WDR92Q96MX6 357 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 SENP7Q9BQF6 1050 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 CRB3Q9BUF7 120 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 CERS4Q9HA82 394 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 CNNM1Q9NRU3 951 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 PNPOQ9NVS9 261 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 GPRC5BQ9NZH0 403 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 FNIP2Q9P278 1114 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 Q9UFV3 132 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 FEZ2Q9UHY8 353 aaPredicted RBP4.88□□□□□ -1.63
HMGB3-203ENST00000430118 ADAMTS6Q9UKP5 1117 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 DGKBQ9Y6T7 804 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 MORC2Q9Y6X9 1032 aaPredicted RBP4.88□□□□□ -1.63
HMGB3-203ENST00000430118 QRICH2Q9H0J4 1663 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 PNPLA7Q6ZV29 1317 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 IRS2Q9Y4H2 1338 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 NSD3Q9BZ95 1437 aa4.88□□□□□ -1.63
HMGB3-203ENST00000430118 SLIT3O75094 1523 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 ADGRB1O14514 1584 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 CICQ96RK0 1608 aaPredicted RBP4.87□□□□□ -1.63
HMGB3-203ENST00000430118 ADAMTS3O15072 1205 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 AKR1B10O60218 316 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 PIP5K1CO60331 668 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 FGF18O76093 207 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 IL18RAPO95256 599 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 HSD3B1P14060 373 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 CRHR1P34998 444 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 CD83Q01151 205 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 ZNF543Q08ER8 600 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 BIRC3Q13489 604 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 DAG1Q14118 895 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 ELF2Q15723 593 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 EMC10Q5UCC4 262 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 CD300LDQ6UXZ3 194 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 TAS1R1Q7RTX1 841 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 HEATR3Q7Z4Q2 680 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 FAM129CQ86XR2 697 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 RHOT1Q8IXI2 618 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 PAF1Q8N7H5 531 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 CASKIN2Q8WXE0 1202 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 LPPQ93052 612 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 NKD2Q969F2 451 aaPredicted RBP4.87□□□□□ -1.63
HMGB3-203ENST00000430118 GFM2Q969S9 779 aaKnown RBP4.87□□□□□ -1.63
HMGB3-203ENST00000430118 TMEM41AQ96HV5 264 aa4.87□□□□□ -1.63
HMGB3-203ENST00000430118 CLPTM1LQ96KA5 538 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms