RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 ZSWIM2Q8NEG5 633 aa12.58□□□□□ -0.4
PABPC1P11-201ENST00000428966 GSDMAQ96QA5 445 aa12.58□□□□□ -0.4
PABPC1P11-201ENST00000428966 PPP1R10Q96QC0 940 aaKnown RBP12.58□□□□□ -0.4
PABPC1P11-201ENST00000428966 MSTO1Q9BUK6 570 aa12.58□□□□□ -0.4
PABPC1P11-201ENST00000428966 VN1R3Q9BXE9 311 aa12.58□□□□□ -0.4
PABPC1P11-201ENST00000428966 TOPORSQ9NS56 1045 aaPredicted RBP12.58□□□□□ -0.4
PABPC1P11-201ENST00000428966 MARCH5Q9NX47 278 aa12.58□□□□□ -0.4
PABPC1P11-201ENST00000428966 EIF3DO15371 548 aaKnown RBP eCLIP12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 RPN1P04843 607 aaKnown RBP12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 OR1G1P47890 313 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 GNG11P61952 73 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 SOX4Q06945 474 aaPredicted RBP12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 TUSC3Q13454 348 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 ENOX2Q16206 610 aaKnown RBP12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 FILIP1LQ4L180 1135 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 PPFIBP1Q86W92 1011 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 KIAA0895Q8NCT3 520 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 TMEM169Q96HH4 297 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 CBWD1Q9BRT8 395 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 TMEM175Q9BSA9 504 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 GOLGA2P5Q9HBQ8 144 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 ZNF446Q9NWS9 450 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 CNTN3Q9P232 1028 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 TTC26A0AVF1 554 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 CASTOR2A6NHX0 329 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 CLTAP09496 248 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 IGFBP6P24592 240 aaPredicted RBP12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 ACOT2P49753 483 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 KRT17Q04695 432 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 UBE3AQ05086 875 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 SLFN12LQ6IEE8 588 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 CRELD2Q6UXH1 353 aaPredicted RBP12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 SYCP3Q8IZU3 236 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 GPR161Q8N6U8 529 aaKnown RBP12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 ZNF507Q8TCN5 953 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 POMGNT1Q8WZA1 660 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 LMAN2LQ9H0V9 348 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 TMEM206Q9H813 350 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 TLR9Q9NR96 1032 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 EXOC1Q9NV70 894 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 CPSF3Q9UKF6 684 aaKnown RBP12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 AGO2Q9UKV8 859 aaKnown RBP12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 EXOC7Q9UPT5 735 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 LZTS1Q9Y250 596 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 FAN1Q9Y2M0 1017 aa12.57□□□□□ -0.4
PABPC1P11-201ENST00000428966 TGFB1I1O43294 461 aa12.56□□□□□ -0.4
PABPC1P11-201ENST00000428966 CCDC175P0C221 793 aa12.56□□□□□ -0.4
PABPC1P11-201ENST00000428966 TUBB4BP68371 445 aa12.56□□□□□ -0.4
PABPC1P11-201ENST00000428966 SPAG1Q07617 926 aa12.56□□□□□ -0.4
PABPC1P11-201ENST00000428966 TUBB2AQ13885 445 aa12.56□□□□□ -0.4
PABPC1P11-201ENST00000428966 NELFCDQ8IXH7 590 aa12.56□□□□□ -0.4
PABPC1P11-201ENST00000428966 TMEM130Q8N3G9 435 aa12.56□□□□□ -0.4
PABPC1P11-201ENST00000428966 TUBB2BQ9BVA1 445 aa12.56□□□□□ -0.4
PABPC1P11-201ENST00000428966 CARD6Q9BX69 1037 aa12.56□□□□□ -0.4
PABPC1P11-201ENST00000428966 PRDM6Q9NQX0 595 aa12.56□□□□□ -0.4
PABPC1P11-201ENST00000428966 C5orf42Q9H799 3197 aa12.56□□□□□ -0.4
PABPC1P11-201ENST00000428966 RHOBTB3O94955 611 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 EFEMP2O95967 443 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 KCNE1P15382 129 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 ADKP55263 362 aaKnown RBP12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 GOLGA8FQ08AF8 430 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 GOLGA8DPQ0D2H9 430 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 BMT2Q1RMZ1 405 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 TCEAL5Q5H9L2 206 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 STXBP4Q6ZWJ1 553 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 ADGRD2Q7Z7M1 963 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 VPS52Q8N1B4 723 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 C18orf25Q96B23 403 aaPredicted RBP12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 SAAL1Q96ER3 474 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 TCF25Q9BQ70 676 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 NSUN3Q9H649 340 aaKnown RBP12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 PUF60Q9UHX1 559 aaKnown RBP12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 FHOD1Q9Y613 1164 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 PLXNA4Q9HCM2 1894 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 HIDE1A8MVS5 230 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 FSCN2O14926 492 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 ZRANB2O95218 330 aaKnown RBP eCLIP12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 KIF4AO95239 1232 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 ADRB2P07550 413 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 GARTP22102 1010 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 CLCNKBP51801 687 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 TIGD5Q53EQ6 642 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 DDX53Q86TM3 631 aaKnown RBP12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 LRRN4CLQ8ND94 238 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 C3orf58Q8NDZ4 430 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 MICAL1Q8TDZ2 1067 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 HASPINQ8TF76 798 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 PCIF1Q9H4Z3 704 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 PLEKHA5Q9HAU0 1116 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 SAMSN1Q9NSI8 373 aaKnown RBP12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 MRFAP1Q9Y605 127 aa12.55□□□□□ -0.4
PABPC1P11-201ENST00000428966 CARNS1A5YM72 827 aa12.54□□□□□ -0.4
PABPC1P11-201ENST00000428966 LACTBL1A8MY62 500 aa12.54□□□□□ -0.4
PABPC1P11-201ENST00000428966 PNMA6AP0CW24 399 aaPredicted RBP12.54□□□□□ -0.4
PABPC1P11-201ENST00000428966 WNT7BP56706 349 aa12.54□□□□□ -0.4
PABPC1P11-201ENST00000428966 PPP2R3AQ06190 1150 aa12.54□□□□□ -0.4
PABPC1P11-201ENST00000428966 PSMD2Q13200 908 aa12.54□□□□□ -0.4
PABPC1P11-201ENST00000428966 KYAT1Q16773 422 aa12.54□□□□□ -0.4
PABPC1P11-201ENST00000428966 UPP1Q16831 310 aa12.54□□□□□ -0.4
PABPC1P11-201ENST00000428966 HSP90AA4PQ58FG1 418 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms