RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 USP8P40818 1118 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 SCNN1GP51170 649 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 MFAP3P55082 362 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 KLHL30Q0D2K2 578 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 CUL2Q13617 745 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 PLEKHG4Q58EX7 1191 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 HGSNATQ68CP4 663 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 AGMOQ6ZNB7 445 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 DEFB128Q7Z7B8 93 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 MRPL10Q7Z7H8 261 aaKnown RBP12.97□□□□□ -0.33
RFC4-206ENST00000427785 ECHDC2Q86YB7 292 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 ACRBPQ8NEB7 543 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 DBF4BQ8NFT6 615 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 KIAA1524Q8TCG1 905 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 SHC3Q92529 594 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 SEPT8Q92599 483 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 SYN2Q92777 582 aaPredicted RBP12.97□□□□□ -0.33
RFC4-206ENST00000427785 RSAD1Q9HA92 442 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 TMEM39AQ9NV64 488 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 CACNG4Q9UBN1 327 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 UBQLN1Q9UMX0 589 aaKnown RBP12.97□□□□□ -0.33
RFC4-206ENST00000427785 AGAP1Q9UPQ3 857 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 INPP5FQ9Y2H2 1132 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 A0A0U1RQF3 1178 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 USP27XA6NNY8 438 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 C9IYK1 514 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 FOXN3O00409 490 aaPredicted RBP12.96□□□□□ -0.33
RFC4-206ENST00000427785 KRT5P13647 590 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 KCNE1P15382 129 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 FERP16591 822 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 EN2P19622 333 aaPredicted RBP12.96□□□□□ -0.33
RFC4-206ENST00000427785 ASPAP45381 313 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 RAP1GAPP47736 663 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 AFF1P51825 1210 aaKnown RBP12.96□□□□□ -0.33
RFC4-206ENST00000427785 CDK17Q00537 523 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 GCNT1Q02742 428 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 ZBTB6Q15916 424 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 XKR4Q5GH76 650 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 ZNF667Q5HYK9 610 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 ZNF598Q86UK7 904 aaKnown RBP12.96□□□□□ -0.33
RFC4-206ENST00000427785 RTN4RL1Q86UN2 441 aaPredicted RBP12.96□□□□□ -0.33
RFC4-206ENST00000427785 PPP1R10Q96QC0 940 aaKnown RBP12.96□□□□□ -0.33
RFC4-206ENST00000427785 TRAIPQ9BWF2 469 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 TSPYL2Q9H2G4 693 aaPredicted RBP12.96□□□□□ -0.33
RFC4-206ENST00000427785 DEF6Q9H4E7 631 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 SMYD3Q9H7B4 428 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 NHEJ1Q9H9Q4 299 aaPredicted RBP12.96□□□□□ -0.33
RFC4-206ENST00000427785 RGS18Q9NS28 235 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 SPTLC3Q9NUV7 552 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 AIPL1Q9NZN9 384 aa12.96□□□□□ -0.33
RFC4-206ENST00000427785 NXF1Q9UBU9 619 aaKnown RBP12.96□□□□□ -0.33
RFC4-206ENST00000427785 VWA8A3KMH1 1905 aa12.96□□□□□ -0.34
RFC4-206ENST00000427785 ARL5CA6NH57 179 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 XPOTO43592 962 aaKnown RBP12.95□□□□□ -0.34
RFC4-206ENST00000427785 ZNF623O75123 536 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 CALCAP01258 141 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 SKIP12755 728 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 CD58P19256 250 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 TBXAS1P24557 533 aaPredicted RBP12.95□□□□□ -0.34
RFC4-206ENST00000427785 KCNJ6P48051 423 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 KIF11P52732 1056 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 RBP5P82980 135 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 SGSM1Q2NKQ1 1148 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 C9orf57Q5W0N0 161 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 ENOSF1Q7L5Y1 443 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 IRF2BP2Q7Z5L9 587 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 UBR7Q8N806 425 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 SLC20A1Q8WUM9 679 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 PGBD4Q96DM1 585 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 HPDLQ96IR7 371 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 FTHL17Q9BXU8 183 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 HAUS4Q9H6D7 363 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 MIOSQ9NXC5 875 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 TRMT1Q9NXH9 659 aaKnown RBP12.95□□□□□ -0.34
RFC4-206ENST00000427785 GIT1Q9Y2X7 761 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 R3HCC1Q9Y3T6 440 aaKnown RBP12.95□□□□□ -0.34
RFC4-206ENST00000427785 COL4A6Q14031 1691 aa12.95□□□□□ -0.34
RFC4-206ENST00000427785 A0A0U1RQJ8 604 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 FAM170AA1A519 330 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 TRIM43BA6NCK2 446 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 CYP26A1O43174 497 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 NDUFA10O95299 355 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 CXCL10P02778 98 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 FGFR1P11362 822 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 ACO1P21399 889 aaKnown RBP12.94□□□□□ -0.34
RFC4-206ENST00000427785 CYLC1P35663 651 aaPredicted RBP12.94□□□□□ -0.34
RFC4-206ENST00000427785 PRKCIP41743 596 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 PTK2Q05397 1052 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 MAPK8IP2Q13387 824 aaPredicted RBP12.94□□□□□ -0.34
RFC4-206ENST00000427785 CLLU1OSQ5K130 101 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 SLC24A5Q71RS6 500 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 ZNF571Q7Z3V5 609 aaPredicted RBP12.94□□□□□ -0.34
RFC4-206ENST00000427785 FAM71AQ8IYT1 594 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 CCAR2Q8N163 923 aaKnown RBP12.94□□□□□ -0.34
RFC4-206ENST00000427785 RBBP8NLQ8NC74 664 aaPredicted RBP12.94□□□□□ -0.34
RFC4-206ENST00000427785 GSTCDQ8NEC7 633 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 OLIG1Q8TAK6 271 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 ATRIPQ8WXE1 791 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 TAF4BQ92750 862 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 APBB2Q92870 758 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms