RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 C3orf58Q8NDZ4 430 aa17.01■□□□□ 0.31
CLK3P2-201ENST00000427566 UROC1Q96N76 676 aa17.01■□□□□ 0.31
CLK3P2-201ENST00000427566 CLSTN2Q9H4D0 955 aa17.01■□□□□ 0.31
CLK3P2-201ENST00000427566 USP15Q9Y4E8 981 aaPredicted RBP17.01■□□□□ 0.31
CLK3P2-201ENST00000427566 C2orf16Q68DN1 1984 aa17.01■□□□□ 0.31
CLK3P2-201ENST00000427566 I3L4J1 428 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 PDXKO00764 312 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 LDHAP00338 332 aaKnown RBP17■□□□□ 0.31
CLK3P2-201ENST00000427566 ADH1AP07327 375 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 RPL17P18621 184 aaKnown RBP17■□□□□ 0.31
CLK3P2-201ENST00000427566 BRCC3P46736 316 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 KCNC3Q14003 757 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 MORC3Q14149 939 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 KIAA0319Q5VV43 1072 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 SCARA3Q6AZY7 606 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 DCLRE1AQ6PJP8 1040 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 CD300LGQ6UXG3 332 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 TMEM184AQ6ZMB5 413 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 PALB2Q86YC2 1186 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 BRSK2Q8IWQ3 736 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 EFCAB13Q8IY85 973 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 C12orf76Q8N812 135 aaPredicted RBP17■□□□□ 0.31
CLK3P2-201ENST00000427566 FBXL18Q96ME1 805 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 PDE11AQ9HCR9 933 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 RBAKQ9NYW8 714 aaPredicted RBP17■□□□□ 0.31
CLK3P2-201ENST00000427566 KIAA1468Q9P260 1216 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 NUB1Q9Y5A7 615 aa17■□□□□ 0.31
CLK3P2-201ENST00000427566 SPTBN5Q9NRC6 3674 aaKnown RBP17■□□□□ 0.31
CLK3P2-201ENST00000427566 PODXLO00592 558 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 TEX28O15482 410 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 LILRB3O75022 631 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 LETM1O95202 739 aaPredicted RBP16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 EFEMP2O95967 443 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 PMS1P54277 932 aaKnown RBP16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 ELAVL2Q12926 359 aaKnown RBP16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 SMAD2Q15796 467 aaKnown RBP16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 UPP1Q16831 310 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 RTP2Q5QGT7 225 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 RARS2Q5T160 578 aaKnown RBP16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 LMBRD2Q68DH5 695 aaPredicted RBP16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 SYCE2Q6PIF2 218 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 LRSAM1Q6UWE0 723 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 C12orf56Q8IXR9 622 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 SLC22A17Q8WUG5 538 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 DDX27Q96GQ7 796 aaKnown RBP16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 TTPALQ9BTX7 342 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 CHST7Q9NS84 486 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 DMAC2Q9NW81 257 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 PPEF2O14830 753 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 SPATA31D3P0C874 917 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 CASP4P49662 377 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 CLCN4P51793 760 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 SNRPFP62306 86 aaKnown RBP16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 SNRNP35Q16560 246 aaKnown RBP16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 ZCWPW2Q504Y3 356 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 CCDC183Q5T5S1 534 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 CES5AQ6NT32 575 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 SPATA31D4Q6ZUB0 917 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 ADSSL1Q8N142 457 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 XXYLT1Q8NBI6 393 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 EEF2KMTQ96G04 330 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 NUP62CLQ9H1M0 184 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 ASB7Q9H672 318 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 DZANK1Q9NVP4 752 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 CGNQ9P2M7 1197 aaKnown RBP16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 CDH22Q9UJ99 828 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 TRAF3IP3Q9Y228 551 aa16.99■□□□□ 0.31
CLK3P2-201ENST00000427566 TRIM49BA6NDI0 452 aa16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 ZNF233A6NK53 670 aa16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 PPP1R3GB7ZBB8 358 aa16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 KIAA0391O15091 583 aaKnown RBP16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 TRAPPC3O43617 180 aa16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 GLUD1P00367 558 aa16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 NR3C1P04150 777 aa16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 WEE2P0C1S8 567 aa16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 HOXB8P17481 243 aaPredicted RBP16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 TMEM132DQ14C87 1099 aa16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 PSMD5Q16401 504 aa16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 COBLL1Q53SF7 1204 aa16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 CD302Q8IX05 232 aa16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 GJD3Q8N144 294 aa16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 RXFP1Q9HBX9 757 aa16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 UBQLN1Q9UMX0 589 aaKnown RBP16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 PTPRJQ12913 1337 aa16.98■□□□□ 0.31
CLK3P2-201ENST00000427566 A0A0C4DFX4 3053 aa16.97■□□□□ 0.31
CLK3P2-201ENST00000427566 TMEM189-UBE2V1I3L0A0 370 aa16.97■□□□□ 0.31
CLK3P2-201ENST00000427566 XPOTO43592 962 aaKnown RBP16.97■□□□□ 0.31
CLK3P2-201ENST00000427566 EXOC3O60645 756 aa16.97■□□□□ 0.31
CLK3P2-201ENST00000427566 KIF20AO95235 890 aa16.97■□□□□ 0.31
CLK3P2-201ENST00000427566 IL18RAPO95256 599 aa16.97■□□□□ 0.31
CLK3P2-201ENST00000427566 SP100P23497 879 aaPredicted RBP16.97■□□□□ 0.31
CLK3P2-201ENST00000427566 TKTP29401 623 aaKnown RBP16.97■□□□□ 0.31
CLK3P2-201ENST00000427566 POU5F1Q01860 360 aaKnown RBP16.97■□□□□ 0.31
CLK3P2-201ENST00000427566 CREMQ03060 361 aa16.97■□□□□ 0.31
CLK3P2-201ENST00000427566 SPATA1Q5VX52 437 aa16.97■□□□□ 0.31
CLK3P2-201ENST00000427566 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.97■□□□□ 0.31
CLK3P2-201ENST00000427566 SLC9A9Q8IVB4 645 aa16.97■□□□□ 0.31
CLK3P2-201ENST00000427566 ADHFE1Q8IWW8 467 aa16.97■□□□□ 0.31
CLK3P2-201ENST00000427566 GOLGA5Q8TBA6 731 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms