RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 ALG3Q92685 438 aa23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 GDAP1L1Q96MZ0 367 aa23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 GNEQ9Y223 722 aaKnown RBP23.26■■□□□ 1.31
CNEP1R1-202ENST00000427478 KRIT1O00522 736 aa23.25■■□□□ 1.31
CNEP1R1-202ENST00000427478 HEXIM1O94992 359 aaKnown RBP23.25■■□□□ 1.31
CNEP1R1-202ENST00000427478 NFICP08651 508 aa23.25■■□□□ 1.31
CNEP1R1-202ENST00000427478 CYP2C19P33261 490 aa23.25■■□□□ 1.31
CNEP1R1-202ENST00000427478 NSFP46459 744 aaKnown RBP23.25■■□□□ 1.31
CNEP1R1-202ENST00000427478 CENPCQ03188 943 aa23.25■■□□□ 1.31
CNEP1R1-202ENST00000427478 ZNF211Q13398 564 aaPredicted RBP23.25■■□□□ 1.31
CNEP1R1-202ENST00000427478 OLFML2BQ68BL8 750 aa23.25■■□□□ 1.31
CNEP1R1-202ENST00000427478 RGMBQ6NW40 437 aa23.25■■□□□ 1.31
CNEP1R1-202ENST00000427478 SCARA5Q6ZMJ2 495 aa23.25■■□□□ 1.31
CNEP1R1-202ENST00000427478 KRT35Q92764 455 aa23.25■■□□□ 1.31
CNEP1R1-202ENST00000427478 RNPC3Q96LT9 517 aaKnown RBP23.25■■□□□ 1.31
CNEP1R1-202ENST00000427478 CARD9Q9H257 536 aa23.25■■□□□ 1.31
CNEP1R1-202ENST00000427478 ZCCHC17Q9NP64 241 aaKnown RBP23.25■■□□□ 1.31
CNEP1R1-202ENST00000427478 A6NJR5 290 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 ERLIN2O94905 339 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 GLI1P08151 1106 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 CYP2B6P20813 491 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 MARCKSL1P49006 195 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 ZNF132P52740 706 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 IRX5P78411 483 aaPredicted RBP23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 C2CD6Q53TS8 623 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 PHLDB2Q86SQ0 1253 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 SAPCD2Q86UD0 394 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 TLK2Q86UE8 772 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 CPNE8Q86YQ8 564 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 ZBTB9Q96C00 473 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 ZSCAN5CA6NGD5 496 aaPredicted RBP23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 LACTBL1A8MY62 500 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 MIF4GDA9UHW6 222 aaKnown RBP23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 MEFVO15553 781 aaPredicted RBP23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 RAD51CO43502 376 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 TSPAN1O60635 241 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 FGGP02679 453 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 KRT19P08727 400 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 ZNF865P0CJ78 1059 aaPredicted RBP23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 ITGA4P13612 1032 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 SMC1AQ14683 1233 aaKnown RBP23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 C17orf99Q6UX52 265 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 IFNL1Q8IU54 200 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 TMEM130Q8N3G9 435 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 UBL4BQ8N7F7 174 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 RPS6KC1Q96S38 1066 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 ZSWIM1Q9BR11 485 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 FAM49AQ9H0Q0 323 aaPredicted RBP23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 XYLT2Q9H1B5 865 aa23.24■■□□□ 1.31
CNEP1R1-202ENST00000427478 A0A0U1RQG5 324 aaPredicted RBP23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 FGFR4P22455 802 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 RRM1P23921 792 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 NOMO3P69849 1222 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 GUCY2DQ02846 1103 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 TMEM62Q0P6H9 643 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 KIZQ2M2Z5 673 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 JADE1Q6IE81 842 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 TRIM72Q6ZMU5 477 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 AENQ8WTP8 325 aaKnown RBP23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 DDX47Q9H0S4 455 aaKnown RBP23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 CISHQ9NSE2 258 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 F2P00734 622 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 SMIM10L2AP0DMW4 78 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 SMIM10L2BP0DMW5 78 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 ZNF394Q53GI3 561 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 LLGL2Q6P1M3 1020 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 MON1BQ7L1V2 547 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 TRIM11Q96F44 468 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 ANAPC7Q9UJX3 599 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 TTC7AQ9ULT0 858 aaPredicted RBP23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 GINS2Q9Y248 185 aa23.23■■□□□ 1.31
CNEP1R1-202ENST00000427478 CITO14578 2027 aa23.22■■□□□ 1.31
CNEP1R1-202ENST00000427478 ESYT3A0FGR9 886 aa23.22■■□□□ 1.31
CNEP1R1-202ENST00000427478 RRN3P2A6NIE6 340 aa23.22■■□□□ 1.31
CNEP1R1-202ENST00000427478 CCDC188H7C350 402 aa23.22■■□□□ 1.31
CNEP1R1-202ENST00000427478 SPOPO43791 374 aa23.22■■□□□ 1.31
CNEP1R1-202ENST00000427478 WEE2P0C1S8 567 aa23.22■■□□□ 1.31
CNEP1R1-202ENST00000427478 ASPAP45381 313 aa23.22■■□□□ 1.31
CNEP1R1-202ENST00000427478 ZNF410Q86VK4 478 aa23.22■■□□□ 1.31
CNEP1R1-202ENST00000427478 IFT20Q8IY31 132 aa23.22■■□□□ 1.31
CNEP1R1-202ENST00000427478 C11orf70Q9BRQ4 267 aa23.22■■□□□ 1.31
CNEP1R1-202ENST00000427478 UBXN6Q9BZV1 441 aa23.22■■□□□ 1.31
CNEP1R1-202ENST00000427478 EPB41L5Q9HCM4 733 aa23.22■■□□□ 1.31
CNEP1R1-202ENST00000427478 AVENQ9NQS1 362 aaPredicted RBP23.22■■□□□ 1.31
CNEP1R1-202ENST00000427478 POLIQ9UNA4 740 aa23.22■■□□□ 1.31
CNEP1R1-202ENST00000427478 MYBL1P10243 752 aa23.21■■□□□ 1.31
CNEP1R1-202ENST00000427478 TNFRSF8P28908 595 aa23.21■■□□□ 1.31
CNEP1R1-202ENST00000427478 AADACL2Q6P093 401 aa23.21■■□□□ 1.31
CNEP1R1-202ENST00000427478 C1orf127Q8N9H9 656 aa23.21■■□□□ 1.31
CNEP1R1-202ENST00000427478 ZNF606Q8WXB4 792 aa23.21■■□□□ 1.31
CNEP1R1-202ENST00000427478 USP6NLQ92738 828 aa23.21■■□□□ 1.31
CNEP1R1-202ENST00000427478 KAT2BQ92831 832 aa23.21■■□□□ 1.31
CNEP1R1-202ENST00000427478 CD101Q93033 1021 aa23.21■■□□□ 1.31
CNEP1R1-202ENST00000427478 GDF3Q9NR23 364 aa23.21■■□□□ 1.31
CNEP1R1-202ENST00000427478 NXF1Q9UBU9 619 aaKnown RBP23.21■■□□□ 1.31
CNEP1R1-202ENST00000427478 SIX4Q9UIU6 781 aa23.21■■□□□ 1.31
CNEP1R1-202ENST00000427478 SLC10A3P09131 477 aa23.21■■□□□ 1.31
CNEP1R1-202ENST00000427478 WNT8AQ9H1J5 351 aa23.21■■□□□ 1.31
CNEP1R1-202ENST00000427478 MROH7Q68CQ1 1323 aa23.2■■□□□ 1.31
CNEP1R1-202ENST00000427478 BRD2P25440 801 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms