RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 USP39Q53GS9 565 aaKnown RBP11.91□□□□□ -0.5
POLR2J4-202ENST00000427076 FAM102AQ5T9C2 384 aaPredicted RBP11.91□□□□□ -0.5
POLR2J4-202ENST00000427076 GRAMD1AQ96CP6 724 aa11.91□□□□□ -0.5
POLR2J4-202ENST00000427076 CITED4Q96RK1 184 aa11.91□□□□□ -0.5
POLR2J4-202ENST00000427076 APOL5Q9BWW9 433 aa11.91□□□□□ -0.5
POLR2J4-202ENST00000427076 SRPRBQ9Y5M8 271 aaKnown RBP11.91□□□□□ -0.5
POLR2J4-202ENST00000427076 SEMA3EO15041 775 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 PCSK7Q16549 785 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 DNAL1Q4LDG9 190 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 EFHC2Q5JST6 749 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 ATG14Q6ZNE5 492 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 UNC5CLQ8IV45 518 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 RNF26Q9BY78 433 aaPredicted RBP11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 IP6K2Q9UHH9 426 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 HAO1Q9UJM8 370 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 ATP9AO75110 1047 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 CALB1P05937 261 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 PRR29P0C7W0 189 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 EIF3EP60228 445 aaKnown RBP11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 P3H1Q32P28 736 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 CDKL3Q8IVW4 592 aaPredicted RBP11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 C2orf69Q8N8R5 385 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 MCRS1Q96EZ8 462 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 RAD21L1Q9H4I0 556 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 HUS1O60921 280 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 PHKG2P15735 406 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 ALOX12P18054 663 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 YWHABP31946 246 aaKnown RBP11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 LRRC63Q05C16 580 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 GTF2H3Q13889 308 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 USP10Q14694 798 aaKnown RBP11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 SURF1Q15526 300 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 OASLQ15646 514 aaKnown RBP11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 CARTPTQ16568 116 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 WLSQ5T9L3 541 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 ITPRIPL1Q6GPH6 555 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 NLGN1Q8N2Q7 840 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 ROGDIQ9GZN7 287 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 CHKBQ9Y259 395 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 FYNP06241 537 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 MLNP12872 115 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 AKT1P31749 480 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 NLRP11P59045 1033 aaKnown RBP11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 ARMCX4Q5H9R4 360 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 IQSEC1Q6DN90 963 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 DGKHQ86XP1 1220 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 C19orf18Q8NEA5 215 aa11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 RANBP17Q9H2T7 1088 aaKnown RBP11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 ZC3H7BQ9UGR2 993 aaKnown RBP11.9□□□□□ -0.5
POLR2J4-202ENST00000427076 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.51
POLR2J4-202ENST00000427076 LCA5LO95447 670 aa11.9□□□□□ -0.51
POLR2J4-202ENST00000427076 NR3C1P04150 777 aa11.9□□□□□ -0.51
POLR2J4-202ENST00000427076 GRSF1Q12849 480 aaKnown RBP eCLIP11.9□□□□□ -0.51
POLR2J4-202ENST00000427076 MEI1Q5TIA1 1274 aa11.9□□□□□ -0.51
POLR2J4-202ENST00000427076 SLC44A2Q8IWA5 706 aaPredicted RBP11.9□□□□□ -0.51
POLR2J4-202ENST00000427076 LRRC39Q96DD0 335 aa11.9□□□□□ -0.51
POLR2J4-202ENST00000427076 IMPAD1Q9NX62 359 aa11.9□□□□□ -0.51
POLR2J4-202ENST00000427076 USP15Q9Y4E8 981 aaPredicted RBP11.9□□□□□ -0.51
POLR2J4-202ENST00000427076 POTEMA6NI47 508 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 PDZK1P1A8MUH7 402 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 CLDN3O15551 220 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 ZNF568Q3ZCX4 644 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 SPIRE2Q8WWL2 714 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 IRX2Q9BZI1 471 aaPredicted RBP11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 INTS2Q9H0H0 1204 aaKnown RBP11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 GJB4Q9NTQ9 266 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 TNFRSF21O75509 655 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 MYL2P10916 166 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 ARL4DP49703 201 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 HPCAP84074 193 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 CCNIQ14094 377 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 DGKKQ5KSL6 1271 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 GPATCH4Q5T3I0 446 aaKnown RBP11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 CYB5D1Q6P9G0 228 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 AGGF1Q8N302 714 aaeCLIP11.89□□□□□ -0.517e-8■■■□□ 14.9
POLR2J4-202ENST00000427076 JADE3Q92613 823 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 PRCCQ92733 491 aaPredicted RBP11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 DYRK4Q9NR20 520 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 PSMD11O00231 422 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 CYP21A2P08686 494 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 POU1F1P28069 291 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 KCNH2Q12809 1159 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 DRAP1Q14919 205 aaPredicted RBP11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 C16orf62Q7Z3J2 963 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 TADA1Q96BN2 335 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 MLH3Q9UHC1 1453 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 HMBSP08397 361 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 HIST1H2AGP0C0S8 130 aaPredicted RBP11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 USP17L8P0C7I0 530 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 HIST1H2ADP20671 130 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 CCND1P24385 295 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 EML3Q32P44 896 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 LRRC71Q8N4P6 559 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 HIST1H2AHQ96KK5 128 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 KCNK16Q96T55 309 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 HIST1H2AJQ99878 128 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 H2AFJQ9BTM1 129 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 BCL2L14Q9BZR8 327 aa11.89□□□□□ -0.51
POLR2J4-202ENST00000427076 ANTXR1Q9H6X2 564 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms