RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 RBM15Q96T37 977 aaKnown RBP eCLIP15.28■□□□□ 0.044e-6■□□□□ 11.3
ERCC3-202ENST00000426778 SAYSD1Q9NPB0 183 aa15.28■□□□□ 0.04
ERCC3-202ENST00000426778 WDR64B1ANS9 1081 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 IFNB1P01574 187 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 HLA-DRAP01903 254 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 ELF1P32519 619 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 PIK3CAP42336 1068 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 GAD2Q05329 585 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 BAATQ14032 418 aaPredicted RBP15.27■□□□□ 0.04
ERCC3-202ENST00000426778 TDRD10Q5VZ19 366 aaKnown RBP15.27■□□□□ 0.04
ERCC3-202ENST00000426778 KCNV2Q8TDN2 545 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 AKT1S1Q96B36 256 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 TMEM237Q96Q45 408 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 PDCD2LQ9BRP1 358 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 TMEM109Q9BVC6 243 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 OSBPL8Q9BZF1 889 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 PDGFDQ9GZP0 370 aaPredicted RBP15.27■□□□□ 0.04
ERCC3-202ENST00000426778 ADAM22Q9P0K1 906 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 DNPEPQ9ULA0 475 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 CTDP1Q9Y5B0 961 aaPredicted RBP15.27■□□□□ 0.04
ERCC3-202ENST00000426778 PCDHB4Q9Y5E5 795 aa15.27■□□□□ 0.04
ERCC3-202ENST00000426778 PEX10O60683 326 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 SKAP2O75563 359 aaPredicted RBP15.27■□□□□ 0.03
ERCC3-202ENST00000426778 SUN1O94901 812 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 MAPTP10636 758 aaKnown RBP15.27■□□□□ 0.03
ERCC3-202ENST00000426778 NQO1P15559 274 aaKnown RBP15.27■□□□□ 0.03
ERCC3-202ENST00000426778 GBP1P32455 592 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 DYNLT1P63172 113 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 ALCAMQ13740 583 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 PTK6Q13882 451 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 MIS18BP1Q6P0N0 1132 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 C4orf19Q8IY42 314 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 GPD1LQ8N335 351 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 TMEM130Q8N3G9 435 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 ATL2Q8NHH9 583 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 SERPINB12Q96P63 405 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 FNBP1Q96RU3 617 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 APOBEC3GQ9HC16 384 aaKnown RBP15.27■□□□□ 0.03
ERCC3-202ENST00000426778 EXOC7Q9UPT5 735 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 TLR3O15455 904 aaKnown RBP15.27■□□□□ 0.03
ERCC3-202ENST00000426778 GBP2P32456 591 aaPredicted RBP15.27■□□□□ 0.03
ERCC3-202ENST00000426778 MTMR2Q13614 643 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 TCEAL1Q15170 157 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 WLSQ5T9L3 541 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 ANKMY2Q8IV38 441 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 ANKLE1Q8NAG6 615 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 MORC4Q8TE76 937 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 FAM212AQ96EL1 285 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 TRAIPQ9BWF2 469 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 PLVAPQ9BX97 442 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 XPNPEP1Q9NQW7 623 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 COQ4Q9Y3A0 265 aa15.27■□□□□ 0.03
ERCC3-202ENST00000426778 WDR91A4D1P6 747 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 OAS1P00973 400 aaKnown RBP15.26■□□□□ 0.03
ERCC3-202ENST00000426778 WDR4P57081 412 aaKnown RBP15.26■□□□□ 0.03
ERCC3-202ENST00000426778 FKBP1AP62942 108 aaKnown RBP15.26■□□□□ 0.03
ERCC3-202ENST00000426778 NOP14P78316 857 aaKnown RBP15.26■□□□□ 0.03
ERCC3-202ENST00000426778 PRAMEF18Q5VWM3 479 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 CCDC60Q8IWA6 550 aaPredicted RBP15.26■□□□□ 0.03
ERCC3-202ENST00000426778 NSMCE1Q8WV22 266 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 CKAP2Q8WWK9 683 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 ZNF668Q96K58 619 aaPredicted RBP15.26■□□□□ 0.03
ERCC3-202ENST00000426778 MFSD14AQ96MC6 490 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 ROPN1BQ9BZX4 212 aaPredicted RBP15.26■□□□□ 0.03
ERCC3-202ENST00000426778 HAPLN2Q9GZV7 340 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 CCDC134Q9H6E4 229 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 ROPN1Q9HAT0 212 aaPredicted RBP15.26■□□□□ 0.03
ERCC3-202ENST00000426778 A1CFQ9NQ94 594 aaKnown RBP15.26■□□□□ 0.03
ERCC3-202ENST00000426778 TBC1D22BQ9NU19 505 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 ZNF148Q9UQR1 794 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 LIG4P49917 911 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 PLCB3Q01970 1234 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 SPDYE2Q495Y8 402 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 BRDTQ58F21 947 aaPredicted RBP15.26■□□□□ 0.03
ERCC3-202ENST00000426778 C7orf43Q8WVR3 580 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 ATG4CQ96DT6 458 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 ZNF541Q9H0D2 1346 aa15.26■□□□□ 0.03
ERCC3-202ENST00000426778 EXOC1LA0A1B0GW35 172 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 ANP32DO95626 131 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 GNA15P30679 374 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 MAGEA4P43358 317 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 CLNS1AP54105 237 aaKnown RBP15.25■□□□□ 0.03
ERCC3-202ENST00000426778 NLRX1Q86UT6 975 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 ECHDC2Q86YB7 292 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 ZNF526Q8TF50 670 aaPredicted RBP15.25■□□□□ 0.03
ERCC3-202ENST00000426778 POLR3FQ9H1D9 316 aaPredicted RBP15.25■□□□□ 0.03
ERCC3-202ENST00000426778 VPS37BQ9H9H4 285 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 PXMP2Q9NR77 195 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 NKIRAS1Q9NYS0 192 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.25■□□□□ 0.03
ERCC3-202ENST00000426778 F8VP50 259 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 VNN1O95497 513 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 ASNSP08243 561 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 HSPA1LP34931 641 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 NRLP54845 237 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 COPS2P61201 443 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 MAMLD1Q13495 774 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 NAA25Q14CX7 972 aa15.25■□□□□ 0.03
ERCC3-202ENST00000426778 PKN2Q16513 984 aaKnown RBP15.25■□□□□ 0.03
ERCC3-202ENST00000426778 WDR44Q5JSH3 913 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms