RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 STRA8Q7Z7C7 330 aa6.59□□□□□ -1.35
LINC01040-201ENST00000425048 UBR7Q8N806 425 aa6.59□□□□□ -1.35
LINC01040-201ENST00000425048 VTA1Q9NP79 307 aa6.59□□□□□ -1.35
LINC01040-201ENST00000425048 DNAJC28Q9NX36 388 aa6.59□□□□□ -1.35
LINC01040-201ENST00000425048 PROB1E7EW31 1015 aa6.58□□□□□ -1.36
LINC01040-201ENST00000425048 ENPP3O14638 875 aa6.58□□□□□ -1.36
LINC01040-201ENST00000425048 KIAA0391O15091 583 aaKnown RBP6.58□□□□□ -1.36
LINC01040-201ENST00000425048 AMY1AP04745 511 aa6.58□□□□□ -1.36
LINC01040-201ENST00000425048 DDCP20711 480 aa6.58□□□□□ -1.36
LINC01040-201ENST00000425048 GRIA3P42263 894 aa6.58□□□□□ -1.36
LINC01040-201ENST00000425048 SOX10P56693 466 aa6.58□□□□□ -1.36
LINC01040-201ENST00000425048 SLFN5Q08AF3 891 aa6.58□□□□□ -1.36
LINC01040-201ENST00000425048 NBPF8Q3BBV2 869 aa6.58□□□□□ -1.36
LINC01040-201ENST00000425048 C1QL2Q7Z5L3 287 aa6.58□□□□□ -1.36
LINC01040-201ENST00000425048 FBXL20Q96IG2 436 aa6.58□□□□□ -1.36
LINC01040-201ENST00000425048 C1QTNF7Q9BXJ2 289 aa6.58□□□□□ -1.36
LINC01040-201ENST00000425048 INTS13Q9NVM9 706 aa6.58□□□□□ -1.36
LINC01040-201ENST00000425048 MYBBP1AQ9BQG0 1328 aaKnown RBP6.57□□□□□ -1.36
LINC01040-201ENST00000425048 A0A1W2PS29 197 aa6.57□□□□□ -1.36
LINC01040-201ENST00000425048 GPR3P46089 330 aa6.57□□□□□ -1.36
LINC01040-201ENST00000425048 PROK1P58294 105 aa6.57□□□□□ -1.36
LINC01040-201ENST00000425048 FPGSQ05932 587 aa6.57□□□□□ -1.36
LINC01040-201ENST00000425048 DACT2Q5SW24 774 aa6.57□□□□□ -1.36
LINC01040-201ENST00000425048 SARAFQ96BY9 339 aa6.57□□□□□ -1.36
LINC01040-201ENST00000425048 CAAP1Q9H8G2 361 aa6.57□□□□□ -1.36
LINC01040-201ENST00000425048 DNM3Q9UQ16 869 aa6.57□□□□□ -1.36
LINC01040-201ENST00000425048 PRAMEF33A0A0G2JMD5 474 aa6.56□□□□□ -1.36
LINC01040-201ENST00000425048 PROM1O43490 865 aa6.56□□□□□ -1.36
LINC01040-201ENST00000425048 PRAMEF10O60809 474 aa6.56□□□□□ -1.36
LINC01040-201ENST00000425048 FCER1AP12319 257 aa6.56□□□□□ -1.36
LINC01040-201ENST00000425048 MAPK10P53779 464 aa6.56□□□□□ -1.36
LINC01040-201ENST00000425048 RPS7P62081 194 aaKnown RBP6.56□□□□□ -1.36
LINC01040-201ENST00000425048 ATP8B2P98198 1209 aa6.56□□□□□ -1.36
LINC01040-201ENST00000425048 CLNKQ7Z7G1 428 aa6.56□□□□□ -1.36
LINC01040-201ENST00000425048 PEG10Q86TG7 708 aaKnown RBP6.56□□□□□ -1.36
LINC01040-201ENST00000425048 ZGPATQ8N5A5 531 aaKnown RBP6.56□□□□□ -1.36
LINC01040-201ENST00000425048 TFAP2BQ92481 460 aa6.56□□□□□ -1.36
LINC01040-201ENST00000425048 AHCYL2Q96HN2 611 aaKnown RBP6.56□□□□□ -1.36
LINC01040-201ENST00000425048 ZNF778Q96MU6 729 aa6.56□□□□□ -1.36
LINC01040-201ENST00000425048 C14orf119Q9NWQ9 140 aa6.56□□□□□ -1.36
LINC01040-201ENST00000425048 NEU2Q9Y3R4 380 aa6.56□□□□□ -1.36
LINC01040-201ENST00000425048 GATA3P23771 443 aa6.55□□□□□ -1.36
LINC01040-201ENST00000425048 SOX5P35711 763 aa6.55□□□□□ -1.36
LINC01040-201ENST00000425048 PTPRRQ15256 657 aa6.55□□□□□ -1.36
LINC01040-201ENST00000425048 TSTD2Q5T7W7 516 aa6.55□□□□□ -1.36
LINC01040-201ENST00000425048 HASPINQ8TF76 798 aa6.55□□□□□ -1.36
LINC01040-201ENST00000425048 TMEM125Q96AQ2 219 aa6.55□□□□□ -1.36
LINC01040-201ENST00000425048 PGBD1Q96JS3 809 aa6.55□□□□□ -1.36
LINC01040-201ENST00000425048 C7orf25Q9BPX7 421 aa6.55□□□□□ -1.36
LINC01040-201ENST00000425048 C11orf54Q9H0W9 315 aaPredicted RBP6.55□□□□□ -1.36
LINC01040-201ENST00000425048 WDR91A4D1P6 747 aa6.54□□□□□ -1.36
LINC01040-201ENST00000425048 HAUS5O94927 633 aa6.54□□□□□ -1.36
LINC01040-201ENST00000425048 KCNA2P16389 499 aa6.54□□□□□ -1.36
LINC01040-201ENST00000425048 MTNR1BP49286 362 aa6.54□□□□□ -1.36
LINC01040-201ENST00000425048 CTXN1P60606 82 aa6.54□□□□□ -1.36
LINC01040-201ENST00000425048 TOR1AIP2Q8NFQ8 470 aa6.54□□□□□ -1.36
LINC01040-201ENST00000425048 OR2I1PQ8NGU4 316 aa6.54□□□□□ -1.36
LINC01040-201ENST00000425048 SLC30A5Q8TAD4 765 aa6.54□□□□□ -1.36
LINC01040-201ENST00000425048 WIPF3A6NGB9 483 aa6.53□□□□□ -1.36
LINC01040-201ENST00000425048 PRKCGP05129 697 aa6.53□□□□□ -1.36
LINC01040-201ENST00000425048 CELA2AP08217 269 aa6.53□□□□□ -1.36
LINC01040-201ENST00000425048 OSMP13725 252 aa6.53□□□□□ -1.36
LINC01040-201ENST00000425048 EXOSC10Q01780 885 aaKnown RBP6.53□□□□□ -1.36
LINC01040-201ENST00000425048 TSHZ1Q6ZSZ6 1077 aa6.53□□□□□ -1.36
LINC01040-201ENST00000425048 DPF1Q92782 380 aa6.53□□□□□ -1.36
LINC01040-201ENST00000425048 CCM2LQ9NUG4 571 aaPredicted RBP6.53□□□□□ -1.36
LINC01040-201ENST00000425048 MANSC4A6NHS7 340 aaPredicted RBP6.52□□□□□ -1.37
LINC01040-201ENST00000425048 AGFG2O95081 481 aa6.52□□□□□ -1.37
LINC01040-201ENST00000425048 MTHFD1P11586 935 aaKnown RBP6.52□□□□□ -1.37
LINC01040-201ENST00000425048 CPEP16870 476 aa6.52□□□□□ -1.37
LINC01040-201ENST00000425048 CTGFP29279 349 aa6.52□□□□□ -1.37
LINC01040-201ENST00000425048 TMPRSS15P98073 1019 aa6.52□□□□□ -1.37
LINC01040-201ENST00000425048 ZNF844Q08AG5 666 aa6.52□□□□□ -1.37
LINC01040-201ENST00000425048 DYRK1AQ13627 763 aa6.52□□□□□ -1.37
LINC01040-201ENST00000425048 STAT4Q14765 748 aa6.52□□□□□ -1.37
LINC01040-201ENST00000425048 SRSF7Q16629 238 aaKnown RBP eCLIP6.52□□□□□ -1.37
LINC01040-201ENST00000425048 UTP14CQ5TAP6 766 aaKnown RBP6.52□□□□□ -1.37
LINC01040-201ENST00000425048 ZNF425Q6IV72 752 aa6.52□□□□□ -1.37
LINC01040-201ENST00000425048 RHOT1Q8IXI2 618 aa6.52□□□□□ -1.37
LINC01040-201ENST00000425048 DDB2Q92466 427 aa6.52□□□□□ -1.37
LINC01040-201ENST00000425048 LPIN2Q92539 896 aa6.52□□□□□ -1.37
LINC01040-201ENST00000425048 DPF2Q92785 391 aa6.52□□□□□ -1.37
LINC01040-201ENST00000425048 ZNF70Q9UC06 446 aaPredicted RBP6.52□□□□□ -1.37
LINC01040-201ENST00000425048 WNT6Q9Y6F9 365 aa6.52□□□□□ -1.37
LINC01040-201ENST00000425048 ELFN1P0C7U0 828 aa6.51□□□□□ -1.37
LINC01040-201ENST00000425048 KRTAP10-9P60411 292 aa6.51□□□□□ -1.37
LINC01040-201ENST00000425048 CD300EQ496F6 205 aaPredicted RBP6.51□□□□□ -1.37
LINC01040-201ENST00000425048 FCRLBQ6BAA4 426 aa6.51□□□□□ -1.37
LINC01040-201ENST00000425048 CHAC2Q8WUX2 184 aa6.51□□□□□ -1.37
LINC01040-201ENST00000425048 TLR10Q9BXR5 811 aa6.51□□□□□ -1.37
LINC01040-201ENST00000425048 INTUQ9ULD6 942 aa6.51□□□□□ -1.37
LINC01040-201ENST00000425048 GPR45Q9Y5Y3 372 aa6.51□□□□□ -1.37
LINC01040-201ENST00000425048 AOX1Q06278 1338 aa6.5□□□□□ -1.37
LINC01040-201ENST00000425048 ADM5C9JUS6 153 aa6.5□□□□□ -1.37
LINC01040-201ENST00000425048 SLC6A4P31645 630 aa6.5□□□□□ -1.37
LINC01040-201ENST00000425048 FAM153CQ494X1 144 aa6.5□□□□□ -1.37
LINC01040-201ENST00000425048 CT47A1Q5JQC4 288 aaPredicted RBP6.5□□□□□ -1.37
LINC01040-201ENST00000425048 ZNF366Q8N895 744 aa6.5□□□□□ -1.37
LINC01040-201ENST00000425048 Q8N9P0 234 aaPredicted RBP6.5□□□□□ -1.37
LINC01040-201ENST00000425048 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms