RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 FRMPD3Q5JV73 1810 aa6.09□□□□□ -1.44
SFXN1-202ENST00000421887 A0A1B0GUL6 1792 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 RPAP1Q9BWH6 1393 aaPredicted RBP6.08□□□□□ -1.44
SFXN1-202ENST00000421887 MAST3O60307 1309 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 SNAP23O00161 211 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 CHL1O00533 1208 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 ZKSCAN1P17029 563 aaPredicted RBP6.08□□□□□ -1.44
SFXN1-202ENST00000421887 GCLCP48506 637 aaPredicted RBP6.08□□□□□ -1.44
SFXN1-202ENST00000421887 MRE11P49959 708 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 MEOX1P50221 254 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 IL13RA1P78552 427 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 HDLBPQ00341 1268 aaKnown RBP6.08□□□□□ -1.44
SFXN1-202ENST00000421887 PABPC4Q13310 644 aaKnown RBP eCLIP6.08□□□□□ -1.44
SFXN1-202ENST00000421887 IFIT5Q13325 482 aaKnown RBP6.08□□□□□ -1.44
SFXN1-202ENST00000421887 MOGSQ13724 837 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 AAK1Q2M2I8 961 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 C9orf50Q5SZB4 431 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 FKBP1CQ5VVH2 108 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 MBNL2Q5VZF2 373 aaKnown RBP6.08□□□□□ -1.44
SFXN1-202ENST00000421887 LARP1BQ659C4 914 aaKnown RBP6.08□□□□□ -1.44
SFXN1-202ENST00000421887 FAM178BQ8IXR5 827 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 TBC1D22AQ8WUA7 517 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 TRIB2Q92519 343 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 ZNF764Q96H86 408 aaPredicted RBP6.08□□□□□ -1.44
SFXN1-202ENST00000421887 RNPC3Q96LT9 517 aaKnown RBP6.08□□□□□ -1.44
SFXN1-202ENST00000421887 P2RX7Q99572 595 aaKnown RBP6.08□□□□□ -1.44
SFXN1-202ENST00000421887 OR10A2Q9H208 303 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 ATP11BQ9Y2G3 1177 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 CDH23Q9H251 3354 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 NCOR1O75376 2440 aa6.08□□□□□ -1.44
SFXN1-202ENST00000421887 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.07□□□□□ -1.44
SFXN1-202ENST00000421887 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.07□□□□□ -1.44
SFXN1-202ENST00000421887 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.07□□□□□ -1.44
SFXN1-202ENST00000421887 TRIM75PA6NK02 468 aa6.07□□□□□ -1.44
SFXN1-202ENST00000421887 PROZP22891 400 aa6.07□□□□□ -1.44
SFXN1-202ENST00000421887 TCP10Q12799 353 aa6.07□□□□□ -1.44
SFXN1-202ENST00000421887 MAP4K2Q12851 820 aa6.07□□□□□ -1.44
SFXN1-202ENST00000421887 AKNAD1Q5T1N1 836 aa6.07□□□□□ -1.44
SFXN1-202ENST00000421887 BTBD8Q5XKL5 378 aa6.07□□□□□ -1.44
SFXN1-202ENST00000421887 SCYL3Q8IZE3 742 aa6.07□□□□□ -1.44
SFXN1-202ENST00000421887 TDRD7Q8NHU6 1098 aaKnown RBP6.07□□□□□ -1.44
SFXN1-202ENST00000421887 FAM151AQ8WW52 585 aa6.07□□□□□ -1.44
SFXN1-202ENST00000421887 SOCS4Q8WXH5 440 aa6.07□□□□□ -1.44
SFXN1-202ENST00000421887 BADQ92934 168 aa6.07□□□□□ -1.44
SFXN1-202ENST00000421887 AGO3Q9H9G7 860 aaKnown RBP6.07□□□□□ -1.44
SFXN1-202ENST00000421887 RIC8BQ9NVN3 520 aa6.07□□□□□ -1.44
SFXN1-202ENST00000421887 ZNF112Q9UJU3 913 aa6.07□□□□□ -1.44
SFXN1-202ENST00000421887 FBXO10Q9UK96 956 aa6.07□□□□□ -1.44
SFXN1-202ENST00000421887 AGTPBP1Q9UPW5 1226 aa6.07□□□□□ -1.44
SFXN1-202ENST00000421887 LRRFIP2Q9Y608 721 aaKnown RBP6.07□□□□□ -1.44
SFXN1-202ENST00000421887 DOCK2Q92608 1830 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 MYH13Q9UKX3 1938 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 ELL2O00472 640 aaPredicted RBP6.06□□□□□ -1.44
SFXN1-202ENST00000421887 SLC26A4O43511 780 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 DDAH1O94760 285 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 RHOBTB3O94955 611 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 LMNAP02545 664 aaKnown RBP6.06□□□□□ -1.44
SFXN1-202ENST00000421887 VAMP1P23763 118 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 CNGA1P29973 690 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 PTGS2P35354 604 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 ZEB1P37275 1124 aaPredicted RBP6.06□□□□□ -1.44
SFXN1-202ENST00000421887 TMPOP42166 694 aaKnown RBP6.06□□□□□ -1.44
SFXN1-202ENST00000421887 GYG1P46976 350 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 C21orf58P58505 322 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 CHAF1AQ13111 956 aaPredicted RBP6.06□□□□□ -1.44
SFXN1-202ENST00000421887 KIZQ2M2Z5 673 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 CAVIN4Q5BKX8 364 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 MAP3K21Q5TCX8 1036 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 KSR2Q6VAB6 950 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 LDHAL6AQ6ZMR3 332 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 TIFAQ96CG3 184 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 IER2Q9BTL4 223 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 MYH16Q9H6N6 1097 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 CNNM1Q9NRU3 951 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 GJD2Q9UKL4 321 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 SH3BP1Q9Y3L3 701 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 AFG3L2Q9Y4W6 797 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 DOCK1Q14185 1865 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 PLXNB2O15031 1838 aa6.06□□□□□ -1.44
SFXN1-202ENST00000421887 CLSPNQ9HAW4 1339 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 PLXNA1Q9UIW2 1896 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 PI4KAP2A4QPH2 592 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 KBTBD13C9JR72 458 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 DNM1LO00429 736 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 ERBB2P04626 1255 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 CCND3P30281 292 aaPredicted RBP6.05□□□□□ -1.44
SFXN1-202ENST00000421887 RGS2P41220 211 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 SCNN1GP51170 649 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 KRTAP10-11P60412 298 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 EIF4HQ15056 248 aaKnown RBP6.05□□□□□ -1.44
SFXN1-202ENST00000421887 CCDC57Q2TAC2 916 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 CCDC30Q5VVM6 783 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 RSPO2Q6UXX9 243 aaPredicted RBP6.05□□□□□ -1.44
SFXN1-202ENST00000421887 LBX2Q6XYB7 198 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 Q6ZRM9 215 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 CCDC129Q6ZRS4 1044 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 VRK3Q8IV63 474 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 PI4KAP1Q8N8J0 262 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 HAS1Q92839 578 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 EPHX3Q9H6B9 360 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms