RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 HGSNATQ68CP4 663 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 AGMOQ6ZNB7 445 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 RTN4RL1Q86UN2 441 aaPredicted RBP15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 FAM71AQ8IYT1 594 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 CRIPAKQ8N1N5 446 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 FAM212AQ96EL1 285 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 KIF12Q96FN5 646 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 PPP1R10Q96QC0 940 aaKnown RBP15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 SPAG5Q96R06 1193 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 LBHD1Q9BQE6 289 aaPredicted RBP15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 UBE2TQ9NPD8 197 aaPredicted RBP15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 DPP3Q9NY33 737 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 HES2Q9Y543 173 aa15.34■□□□□ 0.05
SHMT1P1-201ENST00000419974 PIRO00625 290 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 PHACTR2O75167 634 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 LCA5LO95447 670 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 SERPING1P05155 500 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 PFKMP08237 780 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 PNPLA4P41247 253 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 NOP14P78316 857 aaKnown RBP15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 TRPC3Q13507 836 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 DRAP1Q14919 205 aaPredicted RBP15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 NAB2Q15742 525 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 ASTE1Q2TB18 679 aaPredicted RBP15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 LMBRD2Q68DH5 695 aaPredicted RBP15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 TTC39CQ8N584 583 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 UBR7Q8N806 425 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 KIAA1524Q8TCG1 905 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 KREMEN1Q96MU8 473 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 WNT8AQ9H1J5 351 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 CYP3A43Q9HB55 503 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 APOBEC3GQ9HC16 384 aaKnown RBP15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 NLRC4Q9NPP4 1024 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 TMEM161AQ9NX61 479 aa15.33■□□□□ 0.04
SHMT1P1-201ENST00000419974 RBAK-RBAKDNI3L0D1 243 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 ENPP3O14638 875 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 PTGESO14684 152 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 LRRN2O75325 713 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 TIMP1P01033 207 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 AKAP5P24588 427 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 RPL9P32969 192 aaKnown RBP15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 MYL6P60660 151 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 APBA1Q02410 837 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 CUL2Q13617 745 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 LIMS2Q7Z4I7 341 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 ARHGEF19Q8IW93 802 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 LINC01599Q8WXQ3 324 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 BCO2Q9BYV7 579 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 NIF3L1Q9GZT8 377 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 TMEM39AQ9NV64 488 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 ARHGAP20Q9P2F6 1191 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 AJAP1Q9UKB5 411 aaPredicted RBP15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 ANK1P16157 1881 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 ATP8B3O60423 1300 aa15.32■□□□□ 0.04
SHMT1P1-201ENST00000419974 ARL5CA6NH57 179 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 EFCAB14O75071 495 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 THP07101 528 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 P4HA1P13674 534 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 ACO1P21399 889 aaKnown RBP15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 E4F1Q66K89 784 aaPredicted RBP15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 ZNF662Q6ZS27 426 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 PPM1KQ8N3J5 372 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 DBF4BQ8NFT6 615 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 TATDN2Q93075 761 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 UROC1Q96N76 676 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 SYT11Q9BT88 431 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 RSAD1Q9HA92 442 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 GDAP2Q9NXN4 497 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 KANSL3Q9P2N6 904 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 PARP2Q9UGN5 583 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 NUB1Q9Y5A7 615 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 TANC1Q9C0D5 1861 aa15.31■□□□□ 0.04
SHMT1P1-201ENST00000419974 TRIM43BA6NCK2 446 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 EIF3CLB5ME19 914 aaKnown RBP15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 FOXN3O00409 490 aaPredicted RBP15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 SOX1O00570 391 aaPredicted RBP15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 CCP110O43303 1012 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 HOXA2O43364 376 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 OFD1O75665 1012 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 ITGB3P05106 788 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 BPIFB4P59827 614 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 YWHAEP62258 255 aaKnown RBP15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 GOLGA8FQ08AF8 430 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 GOLGA8DPQ0D2H9 430 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 MYO1EQ12965 1108 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 GRIK3Q13003 919 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 RAPGEF1Q13905 1077 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 ASIC2Q16515 512 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 ZNF699Q32M78 642 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 C9orf57Q5W0N0 161 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 CNKSR3Q6P9H4 555 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 GJB7Q6PEY0 223 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 DPH6Q7L8W6 267 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 TRIM43Q96BQ3 446 aaPredicted RBP15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 VWCEQ96DN2 955 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 DDX27Q96GQ7 796 aaKnown RBP15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 ZNF560Q96MR9 790 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 ZNF830Q96NB3 372 aaPredicted RBP15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 EIF3CQ99613 913 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms