RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 GJB5O95377 273 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 AMHP03971 560 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 FOSL2P15408 326 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 GLB1P16278 677 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 PLCG1P19174 1290 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 ETFBP38117 255 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 PPP2R5CQ13362 524 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 SAFBQ15424 915 aaKnown RBP eCLIP7.75□□□□□ -1.17
HMGN1-205ENST00000419378 ZBTB37Q5TC79 503 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 ANKRD34AQ69YU3 496 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 TSHZ1Q6ZSZ6 1077 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 APBB2Q92870 758 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 SHDQ96IW2 340 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 NACC1Q96RE7 527 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 CELF4Q9BZC1 486 aaKnown RBP7.75□□□□□ -1.17
HMGN1-205ENST00000419378 PRDM12Q9H4Q4 367 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 KDM3AQ9Y4C1 1321 aa7.75□□□□□ -1.17
HMGN1-205ENST00000419378 COL4A6Q14031 1691 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.74□□□□□ -1.17
HMGN1-205ENST00000419378 LCHNA4D1U4 455 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 TMEM150BA6NC51 233 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 FAM181BA6NEQ2 426 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 MARCH6O60337 910 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 NEMFO60524 1076 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 STBD1O95210 358 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 NOS3P29474 1203 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 CD52P31358 61 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 ASPAP45381 313 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 CLCN3P51790 818 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 PSMC5P62195 406 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 ETF1P62495 437 aaKnown RBP7.74□□□□□ -1.17
HMGN1-205ENST00000419378 NRG1Q02297 640 aaPredicted RBP7.74□□□□□ -1.17
HMGN1-205ENST00000419378 SPIRE1Q08AE8 756 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 TARBP2Q15633 366 aaKnown RBP7.74□□□□□ -1.17
HMGN1-205ENST00000419378 CALCRLQ16602 461 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 XKR3Q5GH77 459 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 SLFN12Q8IYM2 578 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 KIAA0319LQ8IZA0 1049 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 MYOCDQ8IZQ8 938 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 NME8Q8N427 588 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 LRRC71Q8N4P6 559 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 METTL13Q8N6R0 699 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 LINC01465Q8N7H1 131 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 USP38Q8NB14 1042 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 C2CD4AQ8NCU7 369 aaPredicted RBP7.74□□□□□ -1.17
HMGN1-205ENST00000419378 FBXO18Q8NFZ0 1043 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 WFDC12Q8WWY7 111 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 TMX3Q96JJ7 454 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 PPP1R16BQ96T49 567 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 WNT10AQ9GZT5 417 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 FOXP1Q9H334 677 aaPredicted RBP7.74□□□□□ -1.17
HMGN1-205ENST00000419378 ATXN3LQ9H3M9 355 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 AGO3Q9H9G7 860 aaKnown RBP7.74□□□□□ -1.17
HMGN1-205ENST00000419378 NRBP2Q9NSY0 501 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 REV1Q9UBZ9 1251 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 ACTL7BQ9Y614 415 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 SQORQ9Y6N5 450 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 EVPLQ92817 2033 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 MYO9BQ13459 2157 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 SPTBN5Q9NRC6 3674 aaKnown RBP7.74□□□□□ -1.17
HMGN1-205ENST00000419378 LOXHD1Q8IVV2 1947 aa7.74□□□□□ -1.17
HMGN1-205ENST00000419378 COL4A4P53420 1690 aaPredicted RBP7.73□□□□□ -1.17
HMGN1-205ENST00000419378 FANCGO15287 622 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 MAGEB2O15479 319 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 BAG4O95429 457 aaKnown RBP7.73□□□□□ -1.17
HMGN1-205ENST00000419378 VTNP04004 478 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 PGRP06401 933 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 IMPDH2P12268 514 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 NTF4P34130 210 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 QARSP47897 775 aaKnown RBP7.73□□□□□ -1.17
HMGN1-205ENST00000419378 PREPP48147 710 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 GIPRP48546 466 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 MCM2P49736 904 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 HTRA4P83105 476 aaPredicted RBP7.73□□□□□ -1.17
HMGN1-205ENST00000419378 TAP1Q03518 808 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 EPHA7Q15375 998 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 KIZQ2M2Z5 673 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 MTERF2Q49AM1 385 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 PLA2G4FQ68DD2 849 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 NCAPH2Q6IBW4 605 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 EFCAB12Q6NXP0 572 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 ANO5Q75V66 913 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 NOSTRINQ8IVI9 506 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 RNF214Q8ND24 703 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 MAFAQ8NHW3 353 aaPredicted RBP7.73□□□□□ -1.17
HMGN1-205ENST00000419378 TMEM40Q8WWA1 233 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 LINC01599Q8WXQ3 324 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 CEP89Q96ST8 783 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 MAP7D2Q96T17 732 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 RAD9AQ99638 391 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 SH2D3AQ9BRG2 576 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 LXNQ9BS40 222 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 TMEM60Q9H2L4 133 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 GSX1Q9H4S2 264 aaPredicted RBP7.73□□□□□ -1.17
HMGN1-205ENST00000419378 CERS4Q9HA82 394 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 FAM105AQ9NUU6 356 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 WRAP73Q9P2S5 460 aaPredicted RBP7.73□□□□□ -1.17
HMGN1-205ENST00000419378 GINS2Q9Y248 185 aa7.73□□□□□ -1.17
HMGN1-205ENST00000419378 LINC01553A4QN01 128 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 SART1O43290 800 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms