RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 BRDTQ58F21 947 aaPredicted RBP15.4■□□□□ 0.06
HDAC9-208ENST00000417496 WDR44Q5JSH3 913 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 C15orf39Q6ZRI6 1047 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 GSTA5Q7RTV2 222 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 CROCCP2Q86T23 111 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 TTLL6Q8N841 843 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 SLC17A8Q8NDX2 589 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 ZNF526Q8TF50 670 aaPredicted RBP15.4■□□□□ 0.06
HDAC9-208ENST00000417496 LPAR1Q92633 364 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 TRAIPQ9BWF2 469 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 ADAM22Q9P0K1 906 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 NAALADL1Q9UQQ1 740 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 PROSCO94903 275 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 KCNJ2P63252 427 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 PRKCEQ02156 737 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 FKBP1CQ5VVH2 108 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 CAPN12Q6ZSI9 719 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 ZNF365Q70YC5 407 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 CCDC91Q7Z6B0 441 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 USP37Q86T82 979 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 SAMD3Q8N6K7 520 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 THOC1Q96FV9 657 aaKnown RBP15.4■□□□□ 0.06
HDAC9-208ENST00000417496 OSBPL8Q9BZF1 889 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 FHDC1Q9C0D6 1143 aaPredicted RBP15.4■□□□□ 0.06
HDAC9-208ENST00000417496 CYP26B1Q9NR63 512 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 ANKFY1Q9P2R3 1169 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 NEU2Q9Y3R4 380 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 PCDHB4Q9Y5E5 795 aa15.4■□□□□ 0.06
HDAC9-208ENST00000417496 C4BPAP04003 597 aaKnown RBP15.39■□□□□ 0.05
HDAC9-208ENST00000417496 CYP1A1P04798 512 aaPredicted RBP15.39■□□□□ 0.05
HDAC9-208ENST00000417496 HARSP12081 509 aaKnown RBP15.39■□□□□ 0.05
HDAC9-208ENST00000417496 ETS1P14921 441 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 KCNA2P16389 499 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 MAP3K10Q02779 954 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 CENPCQ03188 943 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 ZACNQ401N2 412 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 TMEM63BQ5T3F8 832 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 PRAMEF18Q5VWM3 479 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 IZUMO3Q5VZ72 239 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 P3H4Q92791 437 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 MRRFQ96E11 262 aaKnown RBP15.39■□□□□ 0.05
HDAC9-208ENST00000417496 TEPSINQ96N21 525 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 PDLIM7Q9NR12 457 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 PNMA3Q9UL41 463 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 GSTTP1A0A1W2PQM5 241 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 TLR3O15455 904 aaKnown RBP15.39■□□□□ 0.05
HDAC9-208ENST00000417496 MGRN1O60291 552 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 ZBED4O75132 1171 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 ACO1P21399 889 aaKnown RBP15.39■□□□□ 0.05
HDAC9-208ENST00000417496 PSMC4P43686 418 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 P3H1Q32P28 736 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 CRELD2Q6UXH1 353 aaPredicted RBP15.39■□□□□ 0.05
HDAC9-208ENST00000417496 KIF2BQ8N4N8 673 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 CCDC63Q8NA47 563 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 PAIP2Q9BPZ3 127 aaKnown RBP15.39■□□□□ 0.05
HDAC9-208ENST00000417496 MYOZ2Q9NPC6 264 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 AVENQ9NQS1 362 aaPredicted RBP15.39■□□□□ 0.05
HDAC9-208ENST00000417496 ARHGAP28Q9P2N2 729 aa15.39■□□□□ 0.05
HDAC9-208ENST00000417496 USP15Q9Y4E8 981 aaPredicted RBP15.39■□□□□ 0.05
HDAC9-208ENST00000417496 EXTL3O43909 919 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 DGAT1O75907 488 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 GARTP22102 1010 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 GNA15P30679 374 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 MAP2K2P36507 400 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 SLC1A1P43005 524 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 ACTR2P61160 394 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 ZNF394Q53GI3 561 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 SNRNP48Q6IEG0 339 aaKnown RBP15.38■□□□□ 0.05
HDAC9-208ENST00000417496 OR5B17Q8NGF7 314 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 ATP6V0A1Q93050 837 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 HAUS1Q96CS2 278 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 NSRP1Q9H0G5 558 aaKnown RBP15.38■□□□□ 0.05
HDAC9-208ENST00000417496 JPH1Q9HDC5 661 aaPredicted RBP15.38■□□□□ 0.05
HDAC9-208ENST00000417496 AGO2Q9UKV8 859 aaKnown RBP15.38■□□□□ 0.05
HDAC9-208ENST00000417496 ZNRF3Q9ULT6 936 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 NUB1Q9Y5A7 615 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.38■□□□□ 0.05
HDAC9-208ENST00000417496 ATF7P17544 494 aaPredicted RBP15.38■□□□□ 0.05
HDAC9-208ENST00000417496 CCND2P30279 289 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 NOMO3P69849 1222 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 SP2Q02086 613 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 ENOSF1Q7L5Y1 443 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 RHOT1Q8IXI2 618 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 GRK7Q8WTQ7 553 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 IFT74Q96LB3 600 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 TGS1Q96RS0 853 aaKnown RBP15.38■□□□□ 0.05
HDAC9-208ENST00000417496 RBM15Q96T37 977 aaKnown RBP eCLIP15.38■□□□□ 0.05
HDAC9-208ENST00000417496 TARS2Q9BW92 718 aaKnown RBP15.38■□□□□ 0.05
HDAC9-208ENST00000417496 TRIM33Q9UPN9 1127 aa15.38■□□□□ 0.05
HDAC9-208ENST00000417496 LOXHD1Q8IVV2 1947 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 LRRIQ4A6NIV6 560 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 SPAG7O75391 227 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 PIAS1O75925 651 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 ATP6V1G2O95670 118 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 OAS1P00973 400 aaKnown RBP15.37■□□□□ 0.05
HDAC9-208ENST00000417496 EDN1P05305 212 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 CUL2Q13617 745 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 FASTKD3Q14CZ7 662 aaKnown RBP15.37■□□□□ 0.05
HDAC9-208ENST00000417496 TXNRD3NBQ6F5E7 133 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 FAM47EQ6ZV65 393 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms