RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 AXDND1Q5T1B0 1012 aaPredicted RBP19.71■□□□□ 0.75
VCP-202ENST00000417448 N4BP2L1Q5TBK1 243 aaPredicted RBP19.71■□□□□ 0.75
VCP-202ENST00000417448 FAM171A1Q5VUB5 890 aa19.71■□□□□ 0.75
VCP-202ENST00000417448 CDR2LQ86X02 465 aaPredicted RBP19.71■□□□□ 0.75
VCP-202ENST00000417448 CEP57Q86XR8 500 aa19.71■□□□□ 0.75
VCP-202ENST00000417448 KRI1Q8N9T8 703 aaKnown RBP19.71■□□□□ 0.75
VCP-202ENST00000417448 DNASE1L2Q92874 299 aa19.71■□□□□ 0.75
VCP-202ENST00000417448 CDK5RAP3Q96JB5 506 aa19.71■□□□□ 0.75
VCP-202ENST00000417448 POLR3FQ9H1D9 316 aaPredicted RBP19.71■□□□□ 0.75
VCP-202ENST00000417448 DNM3Q9UQ16 869 aa19.71■□□□□ 0.75
VCP-202ENST00000417448 LAMA1P25391 3075 aa19.71■□□□□ 0.75
VCP-202ENST00000417448 SDK1Q7Z5N4 2213 aa19.7■□□□□ 0.74
VCP-202ENST00000417448 NPHP3-ACAD11A0A0J9YXS1 232 aa19.7■□□□□ 0.74
VCP-202ENST00000417448 HRO43593 1189 aa19.7■□□□□ 0.74
VCP-202ENST00000417448 ARF4P18085 180 aaPredicted RBP19.7■□□□□ 0.74
VCP-202ENST00000417448 PTENP60484 403 aa19.7■□□□□ 0.74
VCP-202ENST00000417448 SATB1Q01826 763 aa19.7■□□□□ 0.74
VCP-202ENST00000417448 SIM2Q14190 667 aaPredicted RBP19.7■□□□□ 0.74
VCP-202ENST00000417448 HYIQ5T013 277 aa19.7■□□□□ 0.74
VCP-202ENST00000417448 RASSF8Q8NHQ8 419 aa19.7■□□□□ 0.74
VCP-202ENST00000417448 AK8Q96MA6 479 aa19.7■□□□□ 0.74
VCP-202ENST00000417448 RUSC1Q9BVN2 902 aa19.7■□□□□ 0.74
VCP-202ENST00000417448 MRPS23Q9Y3D9 190 aaKnown RBP19.7■□□□□ 0.74
VCP-202ENST00000417448 STK24Q9Y6E0 443 aa19.7■□□□□ 0.74
VCP-202ENST00000417448 IGF2RP11717 2491 aa19.7■□□□□ 0.74
VCP-202ENST00000417448 A0A087X0B3 334 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 CASTOR2A6NHX0 329 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 B4GALT5O43286 388 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 DGAT1O75907 488 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 YEATS4O95619 227 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 CEBPBP17676 345 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 SHC2P98077 582 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 MBTD1Q05BQ5 628 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 GAS6Q14393 721 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 GRM2Q14416 872 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 MCM6Q14566 821 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 PCBP1Q15365 356 aaKnown RBP eCLIP19.69■□□□□ 0.74
VCP-202ENST00000417448 BSNDQ8WZ55 320 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 ELSPBP1Q96BH3 223 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 CALML4Q96GE6 196 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 TRIM6Q9C030 488 aaPredicted RBP19.69■□□□□ 0.74
VCP-202ENST00000417448 GDPD2Q9HCC8 539 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 GDE1Q9NZC3 331 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 PCDHA7Q9UN72 937 aa19.69■□□□□ 0.74
VCP-202ENST00000417448 RBM19Q9Y4C8 960 aaKnown RBP19.69■□□□□ 0.74
VCP-202ENST00000417448 INO80B-WBP1J3KQ70 363 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 ASAP2O43150 1006 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 RHOP08100 348 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 PLA2G4BP0C869 781 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 CYP11B2P19099 503 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 MUTP22033 750 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 GLRA2P23416 452 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 ARL2P36404 184 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 CCR3P51677 355 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 CACNB1Q02641 598 aaPredicted RBP19.68■□□□□ 0.74
VCP-202ENST00000417448 RAB33AQ14088 237 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 PPP2R5DQ14738 602 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 RINT1Q6NUQ1 792 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 PDILTQ8N807 584 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 TCP11Q8WWU5 503 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 CXCL16Q9H2A7 254 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 LMAN1LQ9HAT1 526 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 BLOC1S4Q9NUP1 217 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 RCOR1Q9UKL0 485 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 PPME1Q9Y570 386 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 ZMYM2Q9UBW7 1377 aa19.68■□□□□ 0.74
VCP-202ENST00000417448 SPAG17Q6Q759 2223 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 SFI1A8K8P3 1242 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 CHURC1-FNTBB4DL54 471 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 MAN2B1O00754 1011 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 TM4SF5O14894 197 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 NPTXRO95502 500 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 IGFBP6P24592 240 aaPredicted RBP19.67■□□□□ 0.74
VCP-202ENST00000417448 OR1D2P34982 312 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 ME1P48163 572 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 FNTBP49356 437 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 TUSC3Q13454 348 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 CAPSQ13938 189 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 UVSSAQ2YD98 709 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 SHC4Q6S5L8 630 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.67■□□□□ 0.74
VCP-202ENST00000417448 IFNLR1Q8IU57 520 aaPredicted RBP19.67■□□□□ 0.74
VCP-202ENST00000417448 EXOC8Q8IYI6 725 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 DDX1Q92499 740 aaKnown RBP19.67■□□□□ 0.74
VCP-202ENST00000417448 IER2Q9BTL4 223 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 CCSER1Q9C0I3 900 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 RXFP3Q9NSD7 469 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 PARP2Q9UGN5 583 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 CFAP45Q9UL16 551 aa19.67■□□□□ 0.74
VCP-202ENST00000417448 PTGESO14684 152 aa19.66■□□□□ 0.74
VCP-202ENST00000417448 CUTAO60888 179 aa19.66■□□□□ 0.74
VCP-202ENST00000417448 PPP6R2O75170 966 aa19.66■□□□□ 0.74
VCP-202ENST00000417448 SLC12A3P55017 1021 aa19.66■□□□□ 0.74
VCP-202ENST00000417448 NAB2Q15742 525 aa19.66■□□□□ 0.74
VCP-202ENST00000417448 ARSHQ5FYA8 562 aa19.66■□□□□ 0.74
VCP-202ENST00000417448 C1orf186Q6ZWK4 172 aa19.66■□□□□ 0.74
VCP-202ENST00000417448 HACE1Q8IYU2 909 aa19.66■□□□□ 0.74
VCP-202ENST00000417448 LEO1Q8WVC0 666 aaPredicted RBP19.66■□□□□ 0.74
VCP-202ENST00000417448 FAM3CQ92520 227 aa19.66■□□□□ 0.74
VCP-202ENST00000417448 BRD9Q9H8M2 597 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms