RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 PHOX2BQ99453 314 aa27.57■■■□□ 2
VEGFA-208ENST00000417285 OXCT2Q9BYC2 517 aaPredicted RBP27.57■■■□□ 2
VEGFA-208ENST00000417285 RPF1Q9H9Y2 349 aaKnown RBP27.57■■■□□ 2
VEGFA-208ENST00000417285 AVENQ9NQS1 362 aaPredicted RBP27.57■■■□□ 2
VEGFA-208ENST00000417285 STK17AQ9UEE5 414 aa27.57■■■□□ 2
VEGFA-208ENST00000417285 PCDHB8Q9UN66 801 aa27.57■■■□□ 2
VEGFA-208ENST00000417285 VWA8A3KMH1 1905 aa27.57■■■□□ 2
VEGFA-208ENST00000417285 MYH11P35749 1972 aa27.57■■■□□ 2
VEGFA-208ENST00000417285 LACTBL1A8MY62 500 aa27.56■■■□□ 2
VEGFA-208ENST00000417285 STK25O00506 426 aa27.56■■■□□ 2
VEGFA-208ENST00000417285 LRG1P02750 347 aa27.56■■■□□ 2
VEGFA-208ENST00000417285 ADRB2P07550 413 aa27.56■■■□□ 2
VEGFA-208ENST00000417285 PTPN2P17706 415 aa27.56■■■□□ 2
VEGFA-208ENST00000417285 PAX3P23760 479 aa27.56■■■□□ 2
VEGFA-208ENST00000417285 ARPP19P56211 112 aa27.56■■■□□ 2
VEGFA-208ENST00000417285 CEBPZQ03701 1054 aaKnown RBP27.56■■■□□ 2
VEGFA-208ENST00000417285 SPECC1Q5M775 1068 aa27.56■■■□□ 2
VEGFA-208ENST00000417285 CWF19L1Q69YN2 538 aaKnown RBP27.56■■■□□ 2
VEGFA-208ENST00000417285 ZNF280DQ6N043 979 aa27.56■■■□□ 2
VEGFA-208ENST00000417285 DDX12PQ92771 950 aa27.56■■■□□ 2
VEGFA-208ENST00000417285 SNX21Q969T3 373 aa27.56■■■□□ 2
VEGFA-208ENST00000417285 MSTO1Q9BUK6 570 aa27.56■■■□□ 2
VEGFA-208ENST00000417285 ST6GALNAC4Q9H4F1 302 aa27.56■■■□□ 2
VEGFA-208ENST00000417285 TUBGCP4Q9UGJ1 667 aa27.56■■■□□ 2
VEGFA-208ENST00000417285 MRPS23Q9Y3D9 190 aaKnown RBP27.56■■■□□ 2
VEGFA-208ENST00000417285 DOCK8Q8NF50 2099 aa27.55■■■□□ 2
VEGFA-208ENST00000417285 WDR27A2RRH5 827 aa27.55■■■□□ 2
VEGFA-208ENST00000417285 M0QZQ0 153 aa27.55■■■□□ 2
VEGFA-208ENST00000417285 SLFN12LQ6IEE8 588 aa27.55■■■□□ 2
VEGFA-208ENST00000417285 PARM1Q6UWI2 310 aa27.55■■■□□ 2
VEGFA-208ENST00000417285 ITFG1Q8TB96 612 aa27.55■■■□□ 2
VEGFA-208ENST00000417285 GDE1Q9NZC3 331 aa27.55■■■□□ 2
VEGFA-208ENST00000417285 MORC2Q9Y6X9 1032 aaPredicted RBP27.55■■■□□ 2
VEGFA-208ENST00000417285 KRBA1A5PL33 1030 aa27.54■■■□□ 2
VEGFA-208ENST00000417285 PI15O43692 258 aa27.54■■■□□ 2
VEGFA-208ENST00000417285 FAM189A1O60320 539 aa27.54■■■□□ 2
VEGFA-208ENST00000417285 RFX1P22670 979 aa27.54■■■□□ 2
VEGFA-208ENST00000417285 TNFSF9P41273 254 aa27.54■■■□□ 2
VEGFA-208ENST00000417285 ENOX2Q16206 610 aaKnown RBP27.54■■■□□ 2
VEGFA-208ENST00000417285 PHLDB3Q6NSJ2 640 aa27.54■■■□□ 2
VEGFA-208ENST00000417285 USP49Q70CQ1 688 aa27.54■■■□□ 2
VEGFA-208ENST00000417285 MAP4K3Q8IVH8 894 aa27.54■■■□□ 2
VEGFA-208ENST00000417285 GPR152Q8TDT2 470 aa27.54■■■□□ 2
VEGFA-208ENST00000417285 FGF14Q92915 247 aa27.54■■■□□ 2
VEGFA-208ENST00000417285 FIZ1Q96SL8 496 aa27.54■■■□□ 2
VEGFA-208ENST00000417285 CYP4F11Q9HBI6 524 aa27.54■■■□□ 2
VEGFA-208ENST00000417285 HCFC1R1Q9NWW0 138 aa27.54■■■□□ 2
VEGFA-208ENST00000417285 CITO14578 2027 aa27.53■■■□□ 2
VEGFA-208ENST00000417285 OAZ2O95190 189 aa27.53■■■□□ 2
VEGFA-208ENST00000417285 RHOP08100 348 aa27.53■■■□□ 2
VEGFA-208ENST00000417285 NMT1P30419 496 aaKnown RBP27.53■■■□□ 2
VEGFA-208ENST00000417285 SPAG1Q07617 926 aa27.53■■■□□ 2
VEGFA-208ENST00000417285 RRAGBQ5VZM2 374 aa27.53■■■□□ 2
VEGFA-208ENST00000417285 SHDQ96IW2 340 aa27.53■■■□□ 2
VEGFA-208ENST00000417285 CLIC6Q96NY7 704 aa27.53■■■□□ 2
VEGFA-208ENST00000417285 USP28Q96RU2 1077 aa27.53■■■□□ 2
VEGFA-208ENST00000417285 AFF4Q9UHB7 1163 aaKnown RBP27.53■■■□□ 2
VEGFA-208ENST00000417285 CPSF3Q9UKF6 684 aaKnown RBP27.53■■■□□ 2
VEGFA-208ENST00000417285 ZNF197O14709 1029 aa27.52■■■□□ 2
VEGFA-208ENST00000417285 POU5F1Q01860 360 aaKnown RBP27.52■■■□□ 2
VEGFA-208ENST00000417285 SLC39A14Q15043 492 aa27.52■■■□□ 2
VEGFA-208ENST00000417285 SV2BQ7L1I2 683 aa27.52■■■□□ 2
VEGFA-208ENST00000417285 HSCBQ8IWL3 235 aa27.52■■■□□ 2
VEGFA-208ENST00000417285 NPAS3Q8IXF0 933 aa27.52■■■□□ 2
VEGFA-208ENST00000417285 CCDC105Q8IYK2 499 aa27.52■■■□□ 2
VEGFA-208ENST00000417285 RPP25Q9BUL9 199 aaKnown RBP27.52■■■□□ 2
VEGFA-208ENST00000417285 CA14Q9ULX7 337 aa27.52■■■□□ 2
VEGFA-208ENST00000417285 DERAQ9Y315 318 aa27.52■■■□□ 2
VEGFA-208ENST00000417285 PROB1E7EW31 1015 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 MICAL2O94851 1124 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 AARSP49588 968 aaKnown RBP eCLIP27.51■■□□□ 1.991e-6■■■■□ 20.6
VEGFA-208ENST00000417285 GPC5P78333 572 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 YWHAHQ04917 246 aaPredicted RBP27.51■■□□□ 1.99
VEGFA-208ENST00000417285 SPATA1Q5VX52 437 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 ZNF720Q7Z2F6 126 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 USP37Q86T82 979 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 ELMOD1Q8N336 334 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 DTWD2Q8NBA8 298 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 BEST2Q8NFU1 509 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 HVCN1Q96D96 273 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 ASB7Q9H672 318 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 ARHGEF3Q9NR81 526 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 FAM86C1Q9NVL1 165 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 SEL1LQ9UBV2 794 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 INSL5Q9Y5Q6 135 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 STYXL1Q9Y6J8 313 aa27.51■■□□□ 1.99
VEGFA-208ENST00000417285 SEC24AO95486 1093 aa27.5■■□□□ 1.99
VEGFA-208ENST00000417285 ADCY1Q08828 1119 aa27.5■■□□□ 1.99
VEGFA-208ENST00000417285 ZBTB41Q5SVQ8 909 aa27.5■■□□□ 1.99
VEGFA-208ENST00000417285 IQCEQ6IPM2 695 aa27.5■■□□□ 1.99
VEGFA-208ENST00000417285 SLC39A4Q6P5W5 647 aa27.5■■□□□ 1.99
VEGFA-208ENST00000417285 DSTYKQ6XUX3 929 aa27.5■■□□□ 1.99
VEGFA-208ENST00000417285 FAM212AQ96EL1 285 aa27.5■■□□□ 1.99
VEGFA-208ENST00000417285 TBC1D17Q9HA65 648 aa27.5■■□□□ 1.99
VEGFA-208ENST00000417285 DOCK6Q96HP0 2047 aa27.5■■□□□ 1.99
VEGFA-208ENST00000417285 WDR87Q6ZQQ6 2873 aa27.5■■□□□ 1.99
VEGFA-208ENST00000417285 GAP43P17677 238 aa27.49■■□□□ 1.99
VEGFA-208ENST00000417285 PFKPQ01813 784 aa27.49■■□□□ 1.99
VEGFA-208ENST00000417285 POSTNQ15063 836 aa27.49■■□□□ 1.99
VEGFA-208ENST00000417285 ZC2HC1CQ53FD0 456 aaPredicted RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms