RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 CST5P28325 142 aaPredicted RBP12.4□□□□□ -0.42
RFFL-205ENST00000415395 HSPA9P38646 679 aaKnown RBP12.4□□□□□ -0.42
RFFL-205ENST00000415395 STAT1P42224 750 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 VEGFBP49765 207 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 BEX3Q00994 111 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 PPP2R5EQ16537 467 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 AMHR2Q16671 573 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 TTMPQ5BVD1 217 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 MMS22LQ6ZRQ5 1243 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 YTHDF3Q7Z739 585 aaKnown RBP12.4□□□□□ -0.42
RFFL-205ENST00000415395 IQCKQ8N0W5 287 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 NME8Q8N427 588 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 USP38Q8NB14 1042 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 TSEN2Q8NCE0 465 aaKnown RBP12.4□□□□□ -0.42
RFFL-205ENST00000415395 NLRP7Q8WX94 980 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 IFT81Q8WYA0 676 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 ZBTB10Q96DT7 871 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 ATP6V1G3Q96LB4 118 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 TCHPQ9BT92 498 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 INTUQ9ULD6 942 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 NFU1Q9UMS0 254 aa12.4□□□□□ -0.42
RFFL-205ENST00000415395 TRIP12Q14669 1992 aaPredicted RBP12.4□□□□□ -0.42
RFFL-205ENST00000415395 A0A0A6YYK5 440 aaPredicted RBP12.4□□□□□ -0.43
RFFL-205ENST00000415395 C17orf102A2RUQ5 167 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 DLATP10515 647 aaKnown RBP12.4□□□□□ -0.43
RFFL-205ENST00000415395 MCF2P10911 925 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 CYP2C9P11712 490 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 NR1D1P20393 614 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 ACOT2P49753 483 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 BIRC3Q13489 604 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 ZNF568Q3ZCX4 644 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 ZACNQ401N2 412 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 GNASQ5JWF2 1037 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 MAP3K21Q5TCX8 1036 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 SV2AQ7L0J3 742 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 ENOSF1Q7L5Y1 443 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 APBB1IPQ7Z5R6 666 aaPredicted RBP12.4□□□□□ -0.43
RFFL-205ENST00000415395 ACTRT1Q8TDG2 376 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 KRT12Q99456 494 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 GCOM2Q9BZD3 368 aaPredicted RBP12.4□□□□□ -0.43
RFFL-205ENST00000415395 ISCUQ9H1K1 167 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 EPN3Q9H201 632 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 ADAMTS10Q9H324 1103 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 MINDY3Q9H8M7 445 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 RAB20Q9NX57 234 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 DNAJC12Q9UKB3 198 aa12.4□□□□□ -0.43
RFFL-205ENST00000415395 CPSF3Q9UKF6 684 aaKnown RBP12.4□□□□□ -0.43
RFFL-205ENST00000415395 TTLL13PA6NNM8 815 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 F8VZ95 297 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 PGRMC1O00264 195 aaKnown RBP12.39□□□□□ -0.43
RFFL-205ENST00000415395 ADAMTS4O75173 837 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 IL18RAPO95256 599 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
RFFL-205ENST00000415395 TNNI1P19237 187 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 SOX5P35711 763 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 MAP2K1Q02750 393 aaPredicted RBP12.39□□□□□ -0.43
RFFL-205ENST00000415395 TMEM132AQ24JP5 1023 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 PHLDB3Q6NSJ2 640 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 TAF2Q6P1X5 1199 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 MAATS1Q7Z4T9 603 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 IRF2BP2Q7Z5L9 587 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 PACS2Q86VP3 889 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 WDR49Q8IV35 697 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 OTUD6BQ8N6M0 293 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 C7orf31Q8N865 590 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 CCDC26Q8TAB7 109 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 CD99L2Q8TCZ2 262 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 SCLT1Q96NL6 688 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 SLITRK6Q9H5Y7 841 aa12.39□□□□□ -0.43
RFFL-205ENST00000415395 RALGAPA2Q2PPJ7 1873 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 FKTNO75072 461 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 GPR32O75388 356 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 KIF4AO95239 1232 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 FTCDO95954 541 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 C4BPAP04003 597 aaKnown RBP12.38□□□□□ -0.43
RFFL-205ENST00000415395 GLI1P08151 1106 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 IQCF3P0C7M6 154 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 MYZAPP0CAP1 466 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 AXLP30530 894 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 CARSP49589 748 aaKnown RBP12.38□□□□□ -0.43
RFFL-205ENST00000415395 GTF2A1P52655 376 aaPredicted RBP12.38□□□□□ -0.43
RFFL-205ENST00000415395 MFAP3P55082 362 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 CAP1Q01518 475 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 HLTFQ14527 1009 aaKnown RBP eCLIP12.38□□□□□ -0.43
RFFL-205ENST00000415395 DRAP1Q14919 205 aaPredicted RBP12.38□□□□□ -0.43
RFFL-205ENST00000415395 SESTD1Q86VW0 696 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 KLHDC9Q8NEP7 349 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 ARL8AQ96BM9 186 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 ZBTB9Q96C00 473 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 NT5C1BQ96P26 610 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 POP1Q99575 1024 aaKnown RBP12.38□□□□□ -0.43
RFFL-205ENST00000415395 CDT1Q9H211 546 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 PLEKHA4Q9H4M7 779 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 XPNPEP3Q9NQH7 507 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 SALL4Q9UJQ4 1053 aa12.38□□□□□ -0.43
RFFL-205ENST00000415395 A0A1B0GUA9 196 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 MYADML2A6NDP7 307 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 B4GALT5O43286 388 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 B4GALT4O60513 344 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 TSPAN1O60635 241 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms