RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 LXNQ9BS40 222 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 CHORDC1Q9UHD1 332 aaPredicted RBP12.26□□□□□ -0.45
SCN4B-202ENST00000415030 BCAP29Q9UHQ4 241 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 TRIM33Q9UPN9 1127 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 NOD1Q9Y239 953 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 ZHX2Q9Y6X8 837 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 CAPN9O14815 690 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 PSTPIP1O43586 416 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 ZBED4O75132 1171 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 ALADP13716 330 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 EPHB2P29323 1055 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 TTC13Q8NBP0 860 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 TRAPPC9Q96Q05 1148 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 LRRC4BQ9NT99 713 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 A8MUI8 341 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 MARCKSL1P49006 195 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 HIF1AQ16665 826 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 DNAL1Q4LDG9 190 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 SNX30Q5VWJ9 437 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 ZNF677Q86XU0 584 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 RCOR2Q8IZ40 523 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 MAML1Q92585 1016 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 FAM163AQ96GL9 167 aaPredicted RBP12.26□□□□□ -0.45
SCN4B-202ENST00000415030 BTBD6Q96KE9 485 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 ZNF570Q96NI8 536 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 AS3MTQ9HBK9 375 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 IP6K2Q9UHH9 426 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 LGALS13Q9UHV8 139 aa12.26□□□□□ -0.45
SCN4B-202ENST00000415030 LPXNO60711 386 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 FESP07332 822 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 RALAP11233 206 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 CCNB1P14635 433 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 PTDSS1P48651 473 aaKnown RBP12.25□□□□□ -0.45
SCN4B-202ENST00000415030 YWHAGP61981 247 aaKnown RBP eCLIP12.25□□□□□ -0.45
SCN4B-202ENST00000415030 GRIK3Q13003 919 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 BBS9Q3SYG4 887 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 ECHDC2Q86YB7 292 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 TTC17Q96AE7 1141 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 TIPINQ9BVW5 301 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 FAM192AQ9GZU8 254 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 PCDHB4Q9Y5E5 795 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 IGSF9BQ9UPX0 1349 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 F5H6K3 240 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 TGFB1I1O43294 461 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 ABCD1P33897 745 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 PIK3CAP42336 1068 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 SLC34A1Q06495 639 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 DCAF12L1Q5VU92 463 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 TTC27Q6P3X3 843 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 DTX3LQ8TDB6 740 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 PPARGC1AQ9UBK2 798 aaKnown RBP12.25□□□□□ -0.45
SCN4B-202ENST00000415030 COL1A1P02452 1464 aaPredicted RBP12.25□□□□□ -0.45
SCN4B-202ENST00000415030 TCEA3O75764 348 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 NPTXRO95502 500 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 CYP1A2P05177 515 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 P4HBP07237 508 aaKnown RBP12.25□□□□□ -0.45
SCN4B-202ENST00000415030 SNHG28P0DPA3 235 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 CYP11B1P15538 503 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 TAC1P20366 129 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 SERPINB4P48594 390 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 STAT2P52630 851 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 MKRN4PQ13434 485 aaPredicted RBP12.25□□□□□ -0.45
SCN4B-202ENST00000415030 PDK4Q16654 411 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 GALNTL6Q49A17 601 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 HAUS6Q7Z4H7 955 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 SLC9A9Q8IVB4 645 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 RMDN2Q96LZ7 410 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 BTBD10Q9BSF8 475 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 KIAA1683Q9H0B3 1180 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 SUDS3Q9H7L9 328 aaPredicted RBP12.25□□□□□ -0.45
SCN4B-202ENST00000415030 MANSC1Q9H8J5 431 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 TRPM3Q9HCF6 1732 aaPredicted RBP12.25□□□□□ -0.45
SCN4B-202ENST00000415030 HNRNPDLO14979 420 aaKnown RBP12.25□□□□□ -0.45
SCN4B-202ENST00000415030 GEMIN4P57678 1058 aaKnown RBP12.25□□□□□ -0.45
SCN4B-202ENST00000415030 C1orf146Q5VVC0 180 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 DNAJC24Q6P3W2 148 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 FAM13CQ8NE31 585 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 PIP4K2CQ8TBX8 421 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 ZNF483Q8TF39 744 aaPredicted RBP12.25□□□□□ -0.45
SCN4B-202ENST00000415030 C11orf70Q9BRQ4 267 aa12.25□□□□□ -0.45
SCN4B-202ENST00000415030 SMAPO00193 183 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 COPEO14579 308 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 TLR3O15455 904 aaKnown RBP12.24□□□□□ -0.45
SCN4B-202ENST00000415030 GRIN3BO60391 1043 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 KRT37O76014 449 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 CLK2P49760 499 aaKnown RBP12.24□□□□□ -0.45
SCN4B-202ENST00000415030 PEX3P56589 373 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 GPSM2P81274 684 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 CEP55Q53EZ4 464 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 PRR5LQ6MZQ0 368 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 MTDHQ86UE4 582 aaKnown RBP12.24□□□□□ -0.45
SCN4B-202ENST00000415030 SPATA24Q86W54 205 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 WWP1Q9H0M0 922 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 TMEM8AQ9HCN3 771 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 KMT5AQ9NQR1 393 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 GINM1Q9NU53 330 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 IL1RAPL1Q9NZN1 696 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 COG5Q9UP83 839 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 ECM29Q5VYK3 1845 aa12.24□□□□□ -0.45
SCN4B-202ENST00000415030 A8MXQ7 604 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms