RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 RRAGAQ7L523 313 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 MRPL10Q7Z7H8 261 aaKnown RBP16.7■□□□□ 0.26
SHMT2-202ENST00000414700 LRRN4CLQ8ND94 238 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 TATDN2Q93075 761 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 ANKRD36BP1Q96IX9 119 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 GAD1Q99259 594 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 NUP58Q9BVL2 599 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 TSPYL2Q9H2G4 693 aaPredicted RBP16.7■□□□□ 0.26
SHMT2-202ENST00000414700 PLEKHA5Q9HAU0 1116 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 APEX2Q9UBZ4 518 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 LUC7L2Q9Y383 392 aaKnown RBP16.7■□□□□ 0.26
SHMT2-202ENST00000414700 C2CD2Q9Y426 696 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 TTC3P53804 2025 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 PHACTR2O75167 634 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 CXCL10P02778 98 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 ITGB3P05106 788 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 GPS2Q13227 327 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 TRIM14Q14142 442 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 ZBTB6Q15916 424 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 XKR4Q5GH76 650 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 SYT10Q6XYQ8 523 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 ECHDC2Q86YB7 292 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 UBXN6Q9BZV1 441 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 RASSF4Q9H2L5 321 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 MIOSQ9NXC5 875 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 CEP72Q9P209 647 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 TDRD15B5MCY1 1934 aaKnown RBP16.69■□□□□ 0.26
SHMT2-202ENST00000414700 ARL5CA6NH57 179 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 LRRC53A6NM62 1247 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 TNNC2P02585 160 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 KRT19P08727 400 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 MYL6P60660 151 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 SOX4Q06945 474 aaPredicted RBP16.69■□□□□ 0.26
SHMT2-202ENST00000414700 SLC24A5Q71RS6 500 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 CACNA2D4Q7Z3S7 1137 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 ZNF598Q86UK7 904 aaKnown RBP16.69■□□□□ 0.26
SHMT2-202ENST00000414700 NAA15Q9BXJ9 866 aaKnown RBP16.69■□□□□ 0.26
SHMT2-202ENST00000414700 GOLGA2P5Q9HBQ8 144 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 APOBEC3GQ9HC16 384 aaKnown RBP16.69■□□□□ 0.26
SHMT2-202ENST00000414700 ABHD10Q9NUJ1 306 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 CACNG4Q9UBN1 327 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 CEP290O15078 2479 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 A0A1W2PQJ5 194 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 ENPP3O14638 875 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 TPM1P09493 284 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 RAB27AP51159 221 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 AP3M2P53677 418 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 RAPGEF1Q13905 1077 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 CD302Q8IX05 232 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 PPM1KQ8N3J5 372 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 UBXN4Q92575 508 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 SEPT8Q92599 483 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 FTHL17Q9BXU8 183 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 UBE2TQ9NPD8 197 aaPredicted RBP16.69■□□□□ 0.26
SHMT2-202ENST00000414700 DPP3Q9NY33 737 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 DNAJC12Q9UKB3 198 aa16.69■□□□□ 0.26
SHMT2-202ENST00000414700 PPEF2O14830 753 aa16.68■□□□□ 0.26
SHMT2-202ENST00000414700 KIAA0355O15063 1070 aa16.68■□□□□ 0.26
SHMT2-202ENST00000414700 TIMP1P01033 207 aa16.68■□□□□ 0.26
SHMT2-202ENST00000414700 CSF2RAP15509 400 aa16.68■□□□□ 0.26
SHMT2-202ENST00000414700 ZBED6P86452 979 aa16.68■□□□□ 0.26
SHMT2-202ENST00000414700 TMEM139Q8IV31 216 aa16.68■□□□□ 0.26
SHMT2-202ENST00000414700 CNGA4Q8IV77 575 aa16.68■□□□□ 0.26
SHMT2-202ENST00000414700 HELQQ8TDG4 1101 aa16.68■□□□□ 0.26
SHMT2-202ENST00000414700 KREMEN1Q96MU8 473 aa16.68■□□□□ 0.26
SHMT2-202ENST00000414700 DNAJC7Q99615 494 aa16.68■□□□□ 0.26
SHMT2-202ENST00000414700 GPR88Q9GZN0 384 aa16.68■□□□□ 0.26
SHMT2-202ENST00000414700 XYLT2Q9H1B5 865 aa16.68■□□□□ 0.26
SHMT2-202ENST00000414700 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
SHMT2-202ENST00000414700 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-202ENST00000414700 POLR3GO15318 223 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-202ENST00000414700 CCP110O43303 1012 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 NRDCO43847 1150 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 KCNE1P15382 129 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 RAG1P15918 1043 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 POLR2BP30876 1174 aaKnown RBP16.67■□□□□ 0.26
SHMT2-202ENST00000414700 SCNN1GP51170 649 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 ARHGAP44Q17R89 818 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 WDR59Q6PJI9 974 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 RSAD1Q9HA92 442 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 CWC15Q9P013 229 aaKnown RBP16.67■□□□□ 0.26
SHMT2-202ENST00000414700 FBXL5Q9UKA1 691 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 CLSTN1O94985 981 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 ASS1P00966 412 aaKnown RBP16.67■□□□□ 0.26
SHMT2-202ENST00000414700 FGFR1P11362 822 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 IGFBP6P24592 240 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-202ENST00000414700 TNNT3P45378 269 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-202ENST00000414700 NOP14P78316 857 aaKnown RBP16.67■□□□□ 0.26
SHMT2-202ENST00000414700 FAM189BP81408 668 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 PDXDC1Q6P996 788 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 NT5DC4Q86YG4 428 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 HACE1Q8IYU2 909 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 OR8K1Q8NGG5 319 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 PPP1R10Q96QC0 940 aaKnown RBP16.67■□□□□ 0.26
SHMT2-202ENST00000414700 INPP5FQ9Y2H2 1132 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 GIT1Q9Y2X7 761 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 DERAQ9Y315 318 aa16.67■□□□□ 0.26
SHMT2-202ENST00000414700 PARNO95453 639 aaKnown RBP16.66■□□□□ 0.26
SHMT2-202ENST00000414700 POMCP01189 267 aa16.66■□□□□ 0.26
SHMT2-202ENST00000414700 JAM2P57087 298 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms