RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 KRT9P35527 623 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 GCKP35557 465 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 CD86P42081 329 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 ATP5OP48047 213 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 POLD2P49005 469 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 ETV1P50549 477 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 CTAG1AP78358 180 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 CETN1Q12798 172 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 MTMR3Q13615 1198 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 PRKG1Q13976 671 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 MTHFSDQ2M296 383 aaKnown RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 MAJINQ3KP22 176 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 KRT71Q3SY84 523 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 BBS9Q3SYG4 887 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 MTERF2Q49AM1 385 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 HSP90AA5PQ58FG0 334 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 SLC45A4Q5BKX6 768 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 CEP78Q5JTW2 689 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 DACT2Q5SW24 774 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 TEX35Q5T0J7 233 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 FAM102BQ5T8I3 360 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 SUSD4Q5VX71 490 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 THOC7Q6I9Y2 204 aaKnown RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 DPP8Q6V1X1 898 aaPredicted RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 CAPN12Q6ZSI9 719 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 CEP68Q76N32 757 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 FASTKD5Q7L8L6 764 aaKnown RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 TMC4Q7Z404 712 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 ATG4DQ86TL0 474 aaPredicted RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 SPATA2LQ8IUW3 424 aaPredicted RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 KSR1Q8IVT5 923 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 CCDC83Q8IWF9 413 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 COLGALT2Q8IYK4 626 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 TCEAL8Q8IYN2 117 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 LRRC47Q8N1G4 583 aaKnown RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 CCDC150Q8NCX0 1101 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 IL17REQ8NFR9 667 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 TCP11Q8WWU5 503 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 STON2Q8WXE9 905 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 ANKRD7Q92527 254 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 RABGGTAQ92696 567 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 CDKL2Q92772 493 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 NXPE3Q969Y0 559 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 MISP3Q96FF7 219 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 HIC2Q96JB3 615 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 CNDP1Q96KN2 507 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 TSGA13Q96PP4 275 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 SIN3AQ96ST3 1273 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 MPHOSPH8Q99549 860 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 TSG101Q99816 390 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 HTATIP2Q9BUP3 242 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 SLC13A1Q9BZW2 595 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 ARHGAP39Q9C0H5 1083 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 STMN4Q9H169 189 aaPredicted RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 SIL1Q9H173 461 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 MRPL46Q9H2W6 279 aaKnown RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 TTC12Q9H892 705 aaPredicted RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 FBRSQ9HAH7 460 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 ALG13Q9NP73 1137 aaKnown RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 ABCF3Q9NUQ8 709 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 LMCD1Q9NZU5 365 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 CEP72Q9P209 647 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 EGFL7Q9UHF1 273 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 GGT7Q9UJ14 662 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 CCPG1Q9ULG6 757 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 MYO6Q9UM54 1294 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 PCDHGC5Q9Y5F6 944 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 IBTKQ9P2D0 1353 aaPredicted RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 CDH23Q9H251 3354 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 ZBED9Q6R2W3 1325 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 ITIH6Q6UXX5 1313 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 MAPK8IP3Q9UPT6 1336 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 TMEM265A0A087WTH1 108 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 A0A1B0GUA9 196 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 FRMD3A2A2Y4 597 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 CTAGE9A4FU28 777 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 GOLGA6L9A6NEM1 432 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 GNAT3A8MTJ3 354 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 A8MVJ9 347 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 PLOD2O00469 737 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 IRS4O14654 1257 aaPredicted RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 P4HA2O15460 535 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 TTI1O43156 1089 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 EXTL3O43909 919 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 OPA1O60313 960 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 NTSR2O95665 410 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 HSPA4LO95757 839 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 POLR3DP05423 398 aaPredicted RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 PGRP06401 933 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 ZBTB48P10074 688 aaPredicted RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 GCFC2P16383 781 aaKnown RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 PCSK2P16519 638 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 TMEM11P17152 192 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 RAB6AP20340 208 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 CAPN3P20807 821 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 ENDOUP21128 410 aaKnown RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 CTGFP29279 349 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 PMLP29590 882 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms