RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 GZF1Q9H116 711 aaPredicted RBP17.81■□□□□ 0.44
LINC00398-201ENST00000414407 MRPL17Q9NRX2 175 aaKnown RBP17.81■□□□□ 0.44
LINC00398-201ENST00000414407 DACH1Q9UI36 760 aa17.81■□□□□ 0.44
LINC00398-201ENST00000414407 TRIM49BA6NDI0 452 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 C2orf71A6NGG8 1288 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 IKBKBO14920 756 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 NCK2O43639 380 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 LILRB3O75022 631 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 URODP06132 367 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 DLATP10515 647 aaKnown RBP17.8■□□□□ 0.44
LINC00398-201ENST00000414407 TNNI1P19237 187 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 FGFR3P22607 806 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 PNPLA4P41247 253 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 GUCY2FP51841 1108 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 PTPN14Q15678 1187 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 KIAA0319Q5VV43 1072 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 PLPP4Q5VZY2 271 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 KIAA1841Q6NSI8 718 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 PDXDC1Q6P996 788 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 TAS1R1Q7RTX1 841 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 LRRC52Q8N7C0 313 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 CXorf38Q8TB03 319 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 PLEKHO2Q8TD55 490 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 SUSD3Q96L08 255 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 TTPALQ9BTX7 342 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 MTMR12Q9C0I1 747 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 RWDD2AQ9UIY3 292 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 CTNND2Q9UQB3 1225 aa17.8■□□□□ 0.44
LINC00398-201ENST00000414407 PTPRJQ12913 1337 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 M0QZQ0 153 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 SYN3O14994 580 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 EPB41P11171 864 aaKnown RBP17.79■□□□□ 0.44
LINC00398-201ENST00000414407 KRT13P13646 458 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 IGFBP6P24592 240 aaPredicted RBP17.79■□□□□ 0.44
LINC00398-201ENST00000414407 ERCC5P28715 1186 aaPredicted RBP17.79■□□□□ 0.44
LINC00398-201ENST00000414407 LILRA4P59901 499 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 RBP5P82980 135 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 CREMQ03060 361 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 TCEAL5Q5H9L2 206 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 FAM171A1Q5VUB5 890 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 FILIP1Q7Z7B0 1213 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 OR5B17Q8NGF7 314 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 MAFAQ8NHW3 353 aaPredicted RBP17.79■□□□□ 0.44
LINC00398-201ENST00000414407 BORCS6Q96GS4 357 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 ZNF560Q96MR9 790 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 DUSP9Q99956 384 aaKnown RBP17.79■□□□□ 0.44
LINC00398-201ENST00000414407 RXFP1Q9HBX9 757 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.79■□□□□ 0.44
LINC00398-201ENST00000414407 TMEM63CQ9P1W3 806 aa17.79■□□□□ 0.44
LINC00398-201ENST00000414407 PRRC2BQ5JSZ5 2229 aaKnown RBP17.78■□□□□ 0.44
LINC00398-201ENST00000414407 ARHGEF37A1IGU5 675 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 LRRIQ3A6PVS8 624 aaPredicted RBP17.78■□□□□ 0.44
LINC00398-201ENST00000414407 HIDE1A8MVS5 230 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 TULP1O00294 542 aaPredicted RBP17.78■□□□□ 0.44
LINC00398-201ENST00000414407 ITGB3P05106 788 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 BRCC3P46736 316 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 TAF6P49848 677 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 VAMP7P51809 220 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 BFSP1Q12934 665 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 COL19A1Q14993 1142 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 SKOR2Q2VWA4 1001 aaPredicted RBP17.78■□□□□ 0.44
LINC00398-201ENST00000414407 LMBRD2Q68DH5 695 aaPredicted RBP17.78■□□□□ 0.44
LINC00398-201ENST00000414407 TRAPPC11Q7Z392 1133 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 CSGALNACT2Q8N6G5 542 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 PIK3R5Q8WYR1 880 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 POP1Q99575 1024 aaKnown RBP17.78■□□□□ 0.44
LINC00398-201ENST00000414407 EMILIN2Q9BXX0 1053 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 FNIP2Q9P278 1114 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 SIX4Q9UIU6 781 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 PCDHB8Q9UN66 801 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 AGAP1Q9UPQ3 857 aa17.78■□□□□ 0.44
LINC00398-201ENST00000414407 R3HCC1Q9Y3T6 440 aaKnown RBP17.78■□□□□ 0.44
LINC00398-201ENST00000414407 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.77■□□□□ 0.44
LINC00398-201ENST00000414407 PPEF2O14830 753 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 FGFR1OPO95684 399 aaKnown RBP17.77■□□□□ 0.44
LINC00398-201ENST00000414407 C1RP00736 705 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 POLR2BP30876 1174 aaKnown RBP17.77■□□□□ 0.44
LINC00398-201ENST00000414407 GTF2H1P32780 548 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 DPCR1Q3MIW9 517 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 SV2CQ496J9 727 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 RTP2Q5QGT7 225 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 SASS6Q6UVJ0 657 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 ANKS3Q6ZW76 656 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 ADGRD2Q7Z7M1 963 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 MICALL1Q8N3F8 863 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 TMEM130Q8N3G9 435 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 APPL2Q8NEU8 664 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 RIN2Q8WYP3 895 aaPredicted RBP17.77■□□□□ 0.44
LINC00398-201ENST00000414407 ZNF516Q92618 1163 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 TLE6Q9H808 572 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 METTL14Q9HCE5 456 aaKnown RBP17.77■□□□□ 0.44
LINC00398-201ENST00000414407 PCDHGC5Q9Y5F6 944 aa17.77■□□□□ 0.44
LINC00398-201ENST00000414407 KPNA7A9QM74 516 aa17.76■□□□□ 0.43
LINC00398-201ENST00000414407 STX10O60499 249 aa17.76■□□□□ 0.43
LINC00398-201ENST00000414407 CSPG5O95196 566 aa17.76■□□□□ 0.43
LINC00398-201ENST00000414407 GNA14O95837 355 aa17.76■□□□□ 0.43
LINC00398-201ENST00000414407 C4BPAP04003 597 aaKnown RBP17.76■□□□□ 0.43
LINC00398-201ENST00000414407 TYMPP19971 482 aa17.76■□□□□ 0.43
LINC00398-201ENST00000414407 STX17P56962 302 aa17.76■□□□□ 0.43
LINC00398-201ENST00000414407 DLG4P78352 724 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms