RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 EIF2B4Q9UI10 523 aaKnown RBP4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 L1RE1Q9UN81 338 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 SORCS3Q9UPU3 1222 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 MARCH11A6NNE9 402 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 A6NNZ2 444 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 H3BUI4 141 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 GNAI3P08754 354 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 SPATA31D3P0C874 917 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 PTTG1IPP53801 180 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 USP14P54578 494 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 RNASE9P60153 205 aaKnown RBP4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 GNAI1P63096 354 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 SLC25A3Q00325 362 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 SLFN5Q08AF3 891 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 FGL2Q14314 439 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 KIF22Q14807 665 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 NRN1LQ496H8 165 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 CCDC157Q569K6 752 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 NPNTQ6UXI9 565 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 SPATA31D4Q6ZUB0 917 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 PPP1R3BQ86XI6 285 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 AOPEPQ8N6M6 819 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 OR56A1Q8NGH5 318 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 TBC1D15Q8TC07 691 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 CACTINQ8WUQ7 758 aaKnown RBP4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 ZNF503Q96F45 646 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 GPR20Q99678 358 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 B3GNT5Q9BYG0 378 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 GPR35Q9HC97 309 aa4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 DDX20Q9UHI6 824 aaKnown RBP4.85□□□□□ -1.63
HMGB1P11-201ENST00000413899 FRMPD2Q68DX3 1309 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 CAPN8A6NHC0 703 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 RNASET2O00584 256 aaKnown RBP4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 ZNF185O15231 689 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 FRS3O43559 492 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 AGFG2O95081 481 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 PRSS23O95084 383 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 SCAF4O95104 1147 aaKnown RBP4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 MATN4O95460 622 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 ZBED1O96006 694 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 GJB1P08034 283 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 TCF15Q12870 199 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 FOXE3Q13461 319 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 GALEQ14376 348 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 PDCD4Q53EL6 469 aaKnown RBP4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 MIIPQ5JXC2 388 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 UTP14CQ5TAP6 766 aaKnown RBP4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 LRRC55Q6ZSA7 311 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 CPT1CQ8TCG5 803 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 BRIX1Q8TDN6 353 aaKnown RBP4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 SH3RF3Q8TEJ3 882 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 SCAMP4Q969E2 229 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 C1orf43Q9BWL3 253 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 RNPEPQ9H4A4 650 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 BRD9Q9H8M2 597 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 DDX21Q9NR30 783 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 TRPM5Q9NZQ8 1165 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 MYRFQ9Y2G1 1151 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 ATP11BQ9Y2G3 1177 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 USP15Q9Y4E8 981 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 PCDHA1Q9Y5I3 950 aa4.84□□□□□ -1.63
HMGB1P11-201ENST00000413899 ARID1BQ8NFD5 2236 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 A0A1B0GTW7 788 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 RPS6KA4O75676 772 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 CHEK2O96017 543 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 C1SP09871 688 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 MYBP10242 640 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 RARBP10826 455 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 NOMO3P69849 1222 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 NOMO2Q5JPE7 1267 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 TSHZ3Q63HK5 1081 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 ARMC6Q6NXE6 501 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 MAEAQ7L5Y9 396 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 SPRED1Q7Z699 444 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 ZNF276Q8N554 614 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 SH2D3CQ8N5H7 860 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 LENG9Q96B70 501 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 PHACTR3Q96KR7 559 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 MRGPRX1Q96LB2 322 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 KLHL32Q96NJ5 620 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 MED15Q96RN5 788 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 PNKPQ96T60 521 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 TEX101Q9BY14 249 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 SARS2Q9NP81 518 aaKnown RBP4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 DKK2Q9UBU2 259 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 SLC45A2Q9UMX9 530 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 FPGT-TNNI3KV9GXZ4 949 aa4.83□□□□□ -1.64
HMGB1P11-201ENST00000413899 TPP1O14773 563 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 FAM20BO75063 409 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 PPFIA4O75335 1185 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 AHSGP02765 367 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 CFIP05156 583 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 FCER1AP12319 257 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 RHCEP18577 417 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 FGFR4P22455 802 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 NR4A1P22736 598 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 ZFP36P26651 326 aaKnown RBP4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 GNALP38405 381 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 BUD31P41223 144 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms