RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 NCK2O43639 380 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 DLATP10515 647 aaKnown RBP25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 FGFR3P22607 806 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 NR2F2P24468 414 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 TKTP29401 623 aaKnown RBP25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 TFF2Q03403 129 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 ADAM15Q13444 863 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 PSMD6Q15008 389 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 SURF1Q15526 300 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 CEP135Q66GS9 1140 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 LLGL2Q6P1M3 1020 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 VN1R2Q8NFZ6 395 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 OR5B17Q8NGF7 314 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 MFSD14AQ96MC6 490 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 KLHL5Q96PQ7 755 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 POP1Q99575 1024 aaKnown RBP25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 EMILIN2Q9BXX0 1053 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 MTMR12Q9C0I1 747 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 GLP2RO95838 553 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 CD44P16070 742 aaKnown RBP25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 DLX2Q07687 328 aaPredicted RBP25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 MYBPC2Q14324 1141 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 SCARA3Q6AZY7 606 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 C1orf127Q8N9H9 656 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 INTS13Q9NVM9 706 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 THEGQ9P2T0 379 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 COG5Q9UP83 839 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 SCN1AP35498 2009 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 TEX28O15482 410 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 TMEM191BP0C7N4 346 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 RPL17P18621 184 aaKnown RBP25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 KCNA5P22460 613 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 LTBRP36941 435 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 NFIL3Q16649 462 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 CENPPQ6IPU0 288 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 SUSD3Q96L08 255 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 FNBP1Q96RU3 617 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 GZF1Q9H116 711 aaPredicted RBP25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 NUP62CLQ9H1M0 184 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 RXFP1Q9HBX9 757 aa25.78■■□□□ 1.72
UBE2E3-202ENST00000410062 TBX10O75333 385 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 ITGB3P05106 788 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 KLRC2P26717 231 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 NDUFV1P49821 464 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 PMS1P54277 932 aaKnown RBP25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 LILRA4P59901 499 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 ADAM9Q13443 819 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 STIM1Q13586 685 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 KCNC3Q14003 757 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 WDR49Q8IV35 697 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 GLYCTKQ8IVS8 523 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 CSGALNACT2Q8N6G5 542 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 LNX1Q8TBB1 728 aaPredicted RBP25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 PLEKHO2Q8TD55 490 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 PIK3R5Q8WYR1 880 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 EEF2KMTQ96G04 330 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 ANKRD36BP1Q96IX9 119 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 FRMD4BQ9Y2L6 1034 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 HCFC2Q9Y5Z7 792 aa25.77■■□□□ 1.72
UBE2E3-202ENST00000410062 H3BQ06 376 aaPredicted RBP25.76■■□□□ 1.71
UBE2E3-202ENST00000410062 SPTLC1O15269 473 aa25.76■■□□□ 1.71
UBE2E3-202ENST00000410062 TNNI1P19237 187 aa25.76■■□□□ 1.71
UBE2E3-202ENST00000410062 RPL13P26373 211 aaKnown RBP25.76■■□□□ 1.71
UBE2E3-202ENST00000410062 POLR2BP30876 1174 aaKnown RBP25.76■■□□□ 1.71
UBE2E3-202ENST00000410062 PSMD5Q16401 504 aa25.76■■□□□ 1.71
UBE2E3-202ENST00000410062 DUOXA2Q1HG44 320 aa25.76■■□□□ 1.71
UBE2E3-202ENST00000410062 EDRF1Q3B7T1 1238 aa25.76■■□□□ 1.71
UBE2E3-202ENST00000410062 ANKRD40Q6AI12 368 aa25.76■■□□□ 1.71
UBE2E3-202ENST00000410062 CGRRF1Q99675 332 aa25.76■■□□□ 1.71
UBE2E3-202ENST00000410062 BARX2Q9UMQ3 279 aaPredicted RBP25.76■■□□□ 1.71
UBE2E3-202ENST00000410062 TRIM49BA6NDI0 452 aa25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 PPP1R3GB7ZBB8 358 aa25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 PSMA7O14818 248 aa25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 AKAP3O75969 853 aa25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 TNNC2P02585 160 aa25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 AARSP49588 968 aaKnown RBP eCLIP25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 KLHL10Q6JEL2 608 aa25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 DSTYKQ6XUX3 929 aa25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 GPR65Q8IYL9 337 aa25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 TSG101Q99816 390 aa25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 CLEC1BQ9P126 229 aa25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 ITGA11Q9UKX5 1188 aa25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 AGAP1Q9UPQ3 857 aa25.75■■□□□ 1.71
UBE2E3-202ENST00000410062 FSD2A1L4K1 749 aa25.74■■□□□ 1.71
UBE2E3-202ENST00000410062 SYN3O14994 580 aa25.74■■□□□ 1.71
UBE2E3-202ENST00000410062 ADH1AP07327 375 aa25.74■■□□□ 1.71
UBE2E3-202ENST00000410062 KRT19P08727 400 aa25.74■■□□□ 1.71
UBE2E3-202ENST00000410062 EPCAMP16422 314 aa25.74■■□□□ 1.71
UBE2E3-202ENST00000410062 TRIML1Q8N9V2 468 aa25.74■■□□□ 1.71
UBE2E3-202ENST00000410062 CXorf38Q8TB03 319 aa25.74■■□□□ 1.71
UBE2E3-202ENST00000410062 DHTKD1Q96HY7 919 aaPredicted RBP25.74■■□□□ 1.71
UBE2E3-202ENST00000410062 FNIP2Q9P278 1114 aa25.74■■□□□ 1.71
UBE2E3-202ENST00000410062 SIX4Q9UIU6 781 aa25.74■■□□□ 1.71
UBE2E3-202ENST00000410062 PCDHB8Q9UN66 801 aa25.74■■□□□ 1.71
UBE2E3-202ENST00000410062 TIMM13Q9Y5L4 95 aaPredicted RBP25.74■■□□□ 1.71
UBE2E3-202ENST00000410062 M0QZQ0 153 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms