RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 MAN1A1P33908 653 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 PRR16Q569H4 304 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 PHLDB3Q6NSJ2 640 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 RPUSD2Q8IZ73 545 aaKnown RBP16.41■□□□□ 0.22
LIMS2-205ENST00000409455 C1orf54Q8WWF1 131 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 SLC7A6OSQ96CW6 309 aaPredicted RBP16.41■□□□□ 0.22
LIMS2-205ENST00000409455 TRAIPQ9BWF2 469 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 USP20Q9Y2K6 914 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 MAGEB2O15479 319 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 CLDN3O15551 220 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 PLA2G6O60733 806 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 ENTPD5O75356 428 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 MTA2O94776 668 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 FAM13AO94988 1023 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 GAS8O95995 478 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 MOGSQ13724 837 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 CCDC6Q16204 474 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 DCAF15Q66K64 600 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 FAM160B2Q86V87 743 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 TTC8Q8TAM2 541 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 ZNF564Q8TBZ8 553 aaPredicted RBP16.41■□□□□ 0.22
LIMS2-205ENST00000409455 RANBP17Q9H2T7 1088 aaKnown RBP16.41■□□□□ 0.22
LIMS2-205ENST00000409455 DENND2DQ9H6A0 471 aaPredicted RBP16.41■□□□□ 0.22
LIMS2-205ENST00000409455 SCOCQ9UIL1 159 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 FEM1BQ9UK73 627 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 RABGAP1Q9Y3P9 1069 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 ATMINO43313 823 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-205ENST00000409455 CETPP11597 493 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 CYP2J2P51589 502 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 WDR4P57081 412 aaKnown RBP16.4■□□□□ 0.22
LIMS2-205ENST00000409455 CYP4A11Q02928 519 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 PTK6Q13882 451 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 STAT4Q14765 748 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 TMED2Q15363 201 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 ZNF746Q6NUN9 644 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-205ENST00000409455 MTHFD1LQ6UB35 978 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 MOXD1Q6UVY6 613 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 MYCT1Q8N699 235 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 ETNPPLQ8TBG4 499 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 LRRC8CQ8TDW0 803 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 GRK7Q8WTQ7 553 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 IKZF4Q9H2S9 585 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 WDR35Q9P2L0 1181 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 ANAPC5Q9UJX4 755 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 LRCH1Q9Y2L9 728 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 SFI1A8K8P3 1242 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 TRAFD1O14545 582 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-205ENST00000409455 CBX6O95503 412 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 MARK3P27448 753 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 VHLP40337 213 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 RFC5P40937 340 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 AP3B2Q13367 1082 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 SPARCL1Q14515 664 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 RIBC1Q8N443 379 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-205ENST00000409455 MBOAT7Q96N66 472 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 WRNIP1Q96S55 665 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 TRIM4Q9C037 500 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 BCAS3Q9H6U6 928 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 PIDD1Q9HB75 910 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 UBE2TQ9NPD8 197 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-205ENST00000409455 GINM1Q9NU53 330 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.4■□□□□ 0.22
LIMS2-205ENST00000409455 NMRK1Q9NWW6 199 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 ZNF112Q9UJU3 913 aa16.4■□□□□ 0.22
LIMS2-205ENST00000409455 MROH7Q68CQ1 1323 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 SMCHD1A6NHR9 2005 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 TBX3O15119 743 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 ASMTLO95671 621 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 T-ENOLP0DO92 83 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 NMT1P30419 496 aaKnown RBP16.39■□□□□ 0.21
LIMS2-205ENST00000409455 ADCY8P40145 1251 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 SESN3P58005 492 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 SPP2Q13103 211 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 NR1H3Q13133 447 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 MTMR2Q13614 643 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 SPDYAQ5MJ70 313 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 CFAP61Q8NHU2 1237 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 VTI1AQ96AJ9 217 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 NUP85Q9BW27 656 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 GSTTP1A0A1W2PQM5 241 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 MAP3K13O43283 966 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 SKIP12755 728 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 CHRNB2P17787 502 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 PTPN4P29074 926 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 ARHGAP4P98171 946 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 COG2Q14746 738 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 LLGL1Q15334 1064 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 TRIP13Q15645 432 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-205ENST00000409455 ZC2HC1CQ53FD0 456 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-205ENST00000409455 PPP1R15BQ5SWA1 713 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 DLK2Q6UY11 383 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 CRYGNQ8WXF5 182 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 LPAR1Q92633 364 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 FAM136AQ96C01 138 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 ZNF333Q96JL9 665 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 BTBD6Q96KE9 485 aa16.39■□□□□ 0.21
LIMS2-205ENST00000409455 FSCN2O14926 492 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 HNRNPCL1O60812 293 aaKnown RBP16.38■□□□□ 0.21
LIMS2-205ENST00000409455 GSTA2P09210 222 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 CDR2Q01850 454 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms