RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 RSRC1Q96IZ7 334 aaKnown RBP6.02□□□□□ -1.45
CLK1-202ENST00000409403 CDK19Q9BWU1 502 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 ASPSCR1Q9BZE9 553 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 PCIF1Q9H4Z3 704 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 ACTR5Q9H9F9 607 aaPredicted RBP6.02□□□□□ -1.45
CLK1-202ENST00000409403 ATP6V0A4Q9HBG4 840 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 MYOTQ9UBF9 498 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 GGA2Q9UJY4 613 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 G3BP2Q9UN86 482 aaKnown RBP6.02□□□□□ -1.45
CLK1-202ENST00000409403 PPP2R2CQ9Y2T4 447 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 SPO11Q9Y5K1 396 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 B3GALT1Q9Y5Z6 326 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 SALL3Q9BXA9 1300 aa6.02□□□□□ -1.45
CLK1-202ENST00000409403 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 SCDO00767 359 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 SLC27A2O14975 620 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 MARCH6O60337 910 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 STX10O60499 249 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 CUTAO60888 179 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 ALDH1L1O75891 902 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 AFMP43652 599 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 CCT4P50991 539 aaKnown RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 EPHA5P54756 1037 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 FAPQ12884 760 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 CEP85LQ5SZL2 805 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 CPZQ66K79 652 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 FSTL4Q6MZW2 842 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 WDR93Q6P2C0 686 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 PAQR3Q6TCH7 311 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 FAM43BQ6ZT52 329 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 C11orf57Q6ZUT1 292 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 HDGFL2Q7Z4V5 671 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 KCNH5Q8NCM2 988 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 RUBCNQ92622 972 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 SLC5A5Q92911 643 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 PEX11GQ96HA9 241 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 ZNF396Q96N95 335 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 KRTAP4-12Q9BQ66 201 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 PAGR1Q9BTK6 254 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 RNF32Q9H0A6 362 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 ALDH8A1Q9H2A2 487 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 HYPKQ9NX55 129 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 ASH2LQ9UBL3 628 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 CDC23Q9UJX2 597 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 YBX2Q9Y2T7 364 aaKnown RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 SIT1Q9Y3P8 196 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 PCDHB4Q9Y5E5 795 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 KDRP35968 1356 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 CTAGE15A4D2H0 777 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 SRRM3A6NNA2 597 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 GOLGA8KD6RF30 607 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 TGM5O43548 720 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 HYAL3O43820 417 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 KIF5CO60282 957 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 WDHD1O75717 1129 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 SNUPNO95149 360 aaKnown RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 CTAGE8P0CG41 777 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 SLC9A1P19634 815 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 GJA4P35212 333 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 GCKP35557 465 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 CCT5P48643 541 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 KIF11P52732 1056 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 SESN3P58005 492 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 ERVFRD-1P60508 538 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 TUSC3Q13454 348 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 ARTNQ5T4W7 220 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 NAIF1Q69YI7 327 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 CPLX2Q6PUV4 134 aaKnown RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 MILR1Q7Z6M3 343 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 CTAGE6Q86UF2 777 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 APLFQ8IW19 511 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 TRIM48Q8IWZ4 208 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 CTAGE4Q8IX94 777 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 RBM12BQ8IXT5 1001 aaKnown RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 CCDC148Q8NFR7 591 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 CCDC26Q8TAB7 109 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 CCDC12Q8WUD4 166 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 DLG3Q92796 817 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 ZKSCAN4Q969J2 545 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 HOOK2Q96ED9 719 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 RPGRIP1Q96KN7 1286 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 ELF4Q99607 663 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 BAG1Q99933 345 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 CRACR2AQ9BSW2 395 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 TRIM8Q9BZR9 551 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 XPO4Q9C0E2 1151 aaKnown RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 SUDS3Q9H7L9 328 aaPredicted RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 RXFP1Q9HBX9 757 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 ACSS2Q9NR19 701 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 KCNH7Q9NS40 1196 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 IFNKQ9P0W0 207 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 MYO1AQ9UBC5 1043 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 DBR1Q9UK59 544 aaKnown RBP6.01□□□□□ -1.45
CLK1-202ENST00000409403 CAPN7Q9Y6W3 813 aa6.01□□□□□ -1.45
CLK1-202ENST00000409403 CACNA1BQ00975 2339 aa6□□□□□ -1.45
CLK1-202ENST00000409403 SOS1Q07889 1333 aaPredicted RBP6□□□□□ -1.45
CLK1-202ENST00000409403 CDHR2Q9BYE9 1310 aa6□□□□□ -1.45
CLK1-202ENST00000409403 USP42Q9H9J4 1324 aaKnown RBP6□□□□□ -1.45
CLK1-202ENST00000409403 IRS2Q9Y4H2 1338 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms