RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 ZC3H11AO75152 810 aaKnown RBP eCLIP11.64□□□□□ -0.55
PDE4D-206ENST00000405053 PHACTR2O75167 634 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 ASS1P00966 412 aaKnown RBP11.64□□□□□ -0.55
PDE4D-206ENST00000405053 LINC00271P0C7V0 271 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 PON1P27169 355 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 POLR2BP30876 1174 aaKnown RBP11.64□□□□□ -0.55
PDE4D-206ENST00000405053 PNPLA4P41247 253 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 PIK3CAP42336 1068 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 MRE11P49959 708 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 CLCNKBP51801 687 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 TRPC3Q13507 836 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 BTG3Q14201 252 aaPredicted RBP11.64□□□□□ -0.55
PDE4D-206ENST00000405053 SGSM1Q2NKQ1 1148 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 PAN2Q504Q3 1202 aaKnown RBP11.64□□□□□ -0.55
PDE4D-206ENST00000405053 FAM117BQ6P1L5 589 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 TRIM65Q6PJ69 517 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 DCLRE1AQ6PJP8 1040 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 TMEM130Q8N3G9 435 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 CLP1Q92989 425 aaKnown RBP11.64□□□□□ -0.55
PDE4D-206ENST00000405053 MRFAP1L1Q96HT8 127 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 FAM193BQ96PV7 902 aaPredicted RBP11.64□□□□□ -0.55
PDE4D-206ENST00000405053 ZBED2Q9BTP6 218 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 TRIM5Q9C035 493 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 INTS2Q9H0H0 1204 aaKnown RBP11.64□□□□□ -0.55
PDE4D-206ENST00000405053 PLCB1Q9NQ66 1216 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 GCNT4Q9P109 453 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 DNAJB4Q9UDY4 337 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 AGAP1Q9UPQ3 857 aa11.64□□□□□ -0.55
PDE4D-206ENST00000405053 CASTOR2A6NHX0 329 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 TULP1O00294 542 aaPredicted RBP11.63□□□□□ -0.55
PDE4D-206ENST00000405053 PPEF2O14830 753 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 TLL1O43897 1013 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 LRRN2O75325 713 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 GALTP07902 379 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 KRT19P08727 400 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 SLC9A1P19634 815 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 SLC11A1P49279 550 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 AARSP49588 968 aaKnown RBP eCLIP11.63□□□□□ -0.55
PDE4D-206ENST00000405053 ZNF75DP51815 510 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 LILRA4P59901 499 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 MYL6P60660 151 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 SYCP1Q15431 976 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 SMYD5Q6GMV2 418 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 FAM109BQ6ICB4 259 aaPredicted RBP11.63□□□□□ -0.55
PDE4D-206ENST00000405053 CD300LGQ6UXG3 332 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 TDHQ8IZJ6 230 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 C3orf58Q8NDZ4 430 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 HPDLQ96IR7 371 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 ZNF560Q96MR9 790 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 PAAF1Q9BRP4 392 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 CRACR2AQ9BSW2 395 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 SIX2Q9NPC8 291 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 GDAP2Q9NXN4 497 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 HCSTQ9UBK5 93 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 FBXL5Q9UKA1 691 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 DAAM1Q9Y4D1 1078 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 PCDHA11Q9Y5I1 949 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 MRPL42Q9Y6G3 142 aaKnown RBP11.63□□□□□ -0.55
PDE4D-206ENST00000405053 CHD9Q3L8U1 2897 aa11.63□□□□□ -0.55
PDE4D-206ENST00000405053 ITIH6Q6UXX5 1313 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.62□□□□□ -0.55
PDE4D-206ENST00000405053 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.62□□□□□ -0.55
PDE4D-206ENST00000405053 NRP1O14786 923 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 SPTLC1O15269 473 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 EFEMP2O95967 443 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 ALDH2P05091 517 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 LAG3P18627 525 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 TAF6P49848 677 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 BCAR1P56945 870 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 NOP14P78316 857 aaKnown RBP11.62□□□□□ -0.55
PDE4D-206ENST00000405053 PLCB2Q00722 1185 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 MYO1EQ12965 1108 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 ZNF699Q32M78 642 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 SV2CQ496J9 727 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 WDR44Q5JSH3 913 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 LIMS2Q7Z4I7 341 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 VSTM4Q8IW00 320 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 FIBCD1Q8N539 461 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 CCDC150Q8NCX0 1101 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 IMPG2Q9BZV3 1241 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 FAM124BQ9H5Z6 455 aaPredicted RBP11.62□□□□□ -0.55
PDE4D-206ENST00000405053 APOBEC3GQ9HC16 384 aaKnown RBP11.62□□□□□ -0.55
PDE4D-206ENST00000405053 MARCH5Q9NX47 278 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 CACNG4Q9UBN1 327 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 APEX2Q9UBZ4 518 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 R3HCC1Q9Y3T6 440 aaKnown RBP11.62□□□□□ -0.55
PDE4D-206ENST00000405053 SCN1AP35498 2009 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 LAMA3Q16787 3333 aa11.62□□□□□ -0.55
PDE4D-206ENST00000405053 A0A1W2PPC1 479 aa11.61□□□□□ -0.55
PDE4D-206ENST00000405053 KPNA7A9QM74 516 aa11.61□□□□□ -0.55
PDE4D-206ENST00000405053 M0QZQ0 153 aa11.61□□□□□ -0.55
PDE4D-206ENST00000405053 B3GAT3O94766 335 aa11.61□□□□□ -0.55
PDE4D-206ENST00000405053 NOL4O94818 638 aa11.61□□□□□ -0.55
PDE4D-206ENST00000405053 KIF4AO95239 1232 aa11.61□□□□□ -0.55
PDE4D-206ENST00000405053 FAM163BP0C2L3 166 aa11.61□□□□□ -0.55
PDE4D-206ENST00000405053 RFX1P22670 979 aa11.61□□□□□ -0.55
PDE4D-206ENST00000405053 IGFBP6P24592 240 aaPredicted RBP11.61□□□□□ -0.55
PDE4D-206ENST00000405053 CDC25BP30305 580 aa11.61□□□□□ -0.55
PDE4D-206ENST00000405053 OR1G1P47890 313 aa11.61□□□□□ -0.55
PDE4D-206ENST00000405053 ALDH7A1P49419 539 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms