RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 C11orf63Q6NUN7 778 aa12.66□□□□□ -0.38
SMS-202ENST00000404933 TMEM270Q6UE05 265 aa12.66□□□□□ -0.38
SMS-202ENST00000404933 CDR2LQ86X02 465 aaPredicted RBP12.66□□□□□ -0.38
SMS-202ENST00000404933 HES6Q96HZ4 224 aa12.66□□□□□ -0.38
SMS-202ENST00000404933 PPP1R16BQ96T49 567 aa12.66□□□□□ -0.38
SMS-202ENST00000404933 AP5M1Q9H0R1 490 aa12.66□□□□□ -0.38
SMS-202ENST00000404933 PDZD7Q9H5P4 517 aa12.66□□□□□ -0.38
SMS-202ENST00000404933 SETD4Q9NVD3 440 aa12.66□□□□□ -0.38
SMS-202ENST00000404933 GTF3C4Q9UKN8 822 aa12.66□□□□□ -0.38
SMS-202ENST00000404933 COG5Q9UP83 839 aa12.66□□□□□ -0.38
SMS-202ENST00000404933 RRP15Q9Y3B9 282 aaKnown RBP12.66□□□□□ -0.38
SMS-202ENST00000404933 Q9Y3F1 56 aa12.66□□□□□ -0.38
SMS-202ENST00000404933 FAM155AB1AL88 458 aaPredicted RBP12.65□□□□□ -0.38
SMS-202ENST00000404933 CSDE1O75534 798 aaKnown RBP12.65□□□□□ -0.38
SMS-202ENST00000404933 CYP1A2P05177 515 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 STAG3L1P0CL83 205 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 SMIM10L2AP0DMW4 78 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 SMIM10L2BP0DMW5 78 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 CXCL8P10145 99 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 ARF4P18085 180 aaPredicted RBP12.65□□□□□ -0.38
SMS-202ENST00000404933 MAGEA9P43362 315 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 MYL6P60660 151 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 VSNL1P62760 191 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 CCL14Q16627 93 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 TRIM72Q6ZMU5 477 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 EFCAB13Q8IY85 973 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 CEP120Q8N960 986 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 RBBP8NLQ8NC74 664 aaPredicted RBP12.65□□□□□ -0.38
SMS-202ENST00000404933 ACTRT1Q8TDG2 376 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 TRIM11Q96F44 468 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 NIF3L1Q9GZT8 377 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 RNF216Q9NWF9 866 aaPredicted RBP12.65□□□□□ -0.38
SMS-202ENST00000404933 SMARCAL1Q9NZC9 954 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 EHD2Q9NZN4 543 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 UVRAGQ9P2Y5 699 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 GJD2Q9UKL4 321 aa12.65□□□□□ -0.38
SMS-202ENST00000404933 UMODL1Q5DID0 1318 aa12.65□□□□□ -0.39
SMS-202ENST00000404933 TSPAN1O60635 241 aa12.65□□□□□ -0.39
SMS-202ENST00000404933 UNGP13051 313 aaPredicted RBP12.65□□□□□ -0.39
SMS-202ENST00000404933 GNA15P30679 374 aa12.65□□□□□ -0.39
SMS-202ENST00000404933 CRHR2Q13324 411 aa12.65□□□□□ -0.39
SMS-202ENST00000404933 MFSD10Q14728 455 aa12.65□□□□□ -0.39
SMS-202ENST00000404933 ZNF699Q32M78 642 aa12.65□□□□□ -0.39
SMS-202ENST00000404933 GLE1Q53GS7 698 aaKnown RBP12.65□□□□□ -0.39
SMS-202ENST00000404933 PPP1R2P3Q6NXS1 205 aa12.65□□□□□ -0.39
SMS-202ENST00000404933 APBB1IPQ7Z5R6 666 aaPredicted RBP12.65□□□□□ -0.39
SMS-202ENST00000404933 KAT2BQ92831 832 aa12.65□□□□□ -0.39
SMS-202ENST00000404933 ZNF653Q96CK0 615 aa12.65□□□□□ -0.39
SMS-202ENST00000404933 CPB2Q96IY4 423 aa12.65□□□□□ -0.39
SMS-202ENST00000404933 ADPGKQ9BRR6 497 aa12.65□□□□□ -0.39
SMS-202ENST00000404933 ASB7Q9H672 318 aa12.65□□□□□ -0.39
SMS-202ENST00000404933 SMIM35A0A1B0GVV1 85 aa12.64□□□□□ -0.39
SMS-202ENST00000404933 MBLAC1A4D2B0 266 aaPredicted RBP12.64□□□□□ -0.39
SMS-202ENST00000404933 PGRMC1O00264 195 aaKnown RBP12.64□□□□□ -0.39
SMS-202ENST00000404933 CEP104O60308 925 aa12.64□□□□□ -0.39
SMS-202ENST00000404933 MYBL1P10243 752 aa12.64□□□□□ -0.39
SMS-202ENST00000404933 TM4SF4P48230 202 aa12.64□□□□□ -0.39
SMS-202ENST00000404933 YWHAEP62258 255 aaKnown RBP12.64□□□□□ -0.39
SMS-202ENST00000404933 PTPROQ16827 1216 aa12.64□□□□□ -0.39
SMS-202ENST00000404933 TMEM192Q8IY95 271 aa12.64□□□□□ -0.39
SMS-202ENST00000404933 UBR7Q8N806 425 aa12.64□□□□□ -0.39
SMS-202ENST00000404933 USP38Q8NB14 1042 aa12.64□□□□□ -0.39
SMS-202ENST00000404933 FAXDC2Q96IV6 333 aa12.64□□□□□ -0.39
SMS-202ENST00000404933 RPS6KC1Q96S38 1066 aa12.64□□□□□ -0.39
SMS-202ENST00000404933 NUP85Q9BW27 656 aa12.64□□□□□ -0.39
SMS-202ENST00000404933 GCOM2Q9BZD3 368 aaPredicted RBP12.64□□□□□ -0.39
SMS-202ENST00000404933 RBM12Q9NTZ6 932 aaKnown RBP12.64□□□□□ -0.39
SMS-202ENST00000404933 ALG6Q9Y672 507 aa12.64□□□□□ -0.39
SMS-202ENST00000404933 A0A1B0GUA9 196 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 FAM170AA1A519 330 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 LACTBL1A8MY62 500 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 MIF4GDA9UHW6 222 aaKnown RBP12.63□□□□□ -0.39
SMS-202ENST00000404933 CALCAP01258 141 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 IGHA2P01877 340 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 CYP1A1P04798 512 aaPredicted RBP12.63□□□□□ -0.39
SMS-202ENST00000404933 TNNT3P45378 269 aaPredicted RBP12.63□□□□□ -0.39
SMS-202ENST00000404933 NSFP46459 744 aaKnown RBP12.63□□□□□ -0.39
SMS-202ENST00000404933 PSEN2P49810 448 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 ZNF132P52740 706 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 CENPCQ03188 943 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 PCBP1Q15365 356 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMS-202ENST00000404933 DCAF4L1Q3SXM0 396 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 RASGEF1CQ8N431 466 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 ZNF564Q8TBZ8 553 aaPredicted RBP12.63□□□□□ -0.39
SMS-202ENST00000404933 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMS-202ENST00000404933 LRRC1Q9BTT6 524 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 KATNAL1Q9BW62 490 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 FAM49AQ9H0Q0 323 aaPredicted RBP12.63□□□□□ -0.39
SMS-202ENST00000404933 ADAMTS10Q9H324 1103 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 AVENQ9NQS1 362 aaPredicted RBP12.63□□□□□ -0.39
SMS-202ENST00000404933 CNOT8Q9UFF9 292 aaKnown RBP12.63□□□□□ -0.39
SMS-202ENST00000404933 ABT1Q9ULW3 272 aaKnown RBP12.63□□□□□ -0.39
SMS-202ENST00000404933 FAN1Q9Y2M0 1017 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 CITO14578 2027 aa12.63□□□□□ -0.39
SMS-202ENST00000404933 HAS3O00219 553 aa12.62□□□□□ -0.39
SMS-202ENST00000404933 DDX3YO15523 660 aaKnown RBP12.62□□□□□ -0.39
SMS-202ENST00000404933 THAP12O43422 761 aa12.62□□□□□ -0.39
SMS-202ENST00000404933 CA12O43570 354 aa12.62□□□□□ -0.39
SMS-202ENST00000404933 MYL3P08590 195 aa12.62□□□□□ -0.39
SMS-202ENST00000404933 CYP2C9P11712 490 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms