RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 NOMO3P69849 1222 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 TFAMQ00059 246 aaKnown RBP13.11□□□□□ -0.31
CLIP4-203ENST00000401617 MON1BQ7L1V2 547 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 CXorf38Q8TB03 319 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 AENQ8WTP8 325 aaKnown RBP13.11□□□□□ -0.31
CLIP4-203ENST00000401617 ALG3Q92685 438 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 FAM212AQ96EL1 285 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 TRIM11Q96F44 468 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 VCPIP1Q96JH7 1222 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 ADAMTS10Q9H324 1103 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 ASB7Q9H672 318 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 GDF3Q9NR23 364 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 Q9Y3F1 56 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 A0A1B0GUA9 196 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 LACTBL1A8MY62 500 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 HAS3O00219 553 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 TSPAN1O60635 241 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 CSDE1O75534 798 aaKnown RBP13.11□□□□□ -0.31
CLIP4-203ENST00000401617 GNA15P30679 374 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 ADAM17P78536 824 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 CDC42EP1Q00587 391 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 SLC7A5Q01650 507 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 TRPC3Q13507 836 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 CASP8Q14790 479 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 TMEM132AQ24JP5 1023 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 PPP1R2P3Q6NXS1 205 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 CYFIP2Q96F07 1278 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 KRT12Q99456 494 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 WNT8AQ9H1J5 351 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 SETD4Q9NVD3 440 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 CNOT8Q9UFF9 292 aaKnown RBP13.11□□□□□ -0.31
CLIP4-203ENST00000401617 CHORDC1Q9UHD1 332 aaPredicted RBP13.11□□□□□ -0.31
CLIP4-203ENST00000401617 SIX4Q9UIU6 781 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 RALGAPA2Q2PPJ7 1873 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 NRCAMQ92823 1304 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 PASKQ96RG2 1323 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 FAM170AA1A519 330 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 FAM155AB1AL88 458 aaPredicted RBP13.1□□□□□ -0.31
CLIP4-203ENST00000401617 COMTP21964 271 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 CTNNA2P26232 953 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 RNASE9P60153 205 aaKnown RBP13.1□□□□□ -0.31
CLIP4-203ENST00000401617 OSTNP61366 133 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 SLC10A6Q3KNW5 377 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 PHF13Q86YI8 300 aaPredicted RBP13.1□□□□□ -0.31
CLIP4-203ENST00000401617 NLRP7Q8WX94 980 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 ZNF606Q8WXB4 792 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 CPB2Q96IY4 423 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 ZSWIM1Q9BR11 485 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 VRTNQ9H8Y1 702 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 VIPAS39Q9H9C1 493 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 SMIM35A0A1B0GVV1 85 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 GLI1P08151 1106 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 CFHP08603 1231 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 SMIM10L2AP0DMW4 78 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 SMIM10L2BP0DMW5 78 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 RGS2P41220 211 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 ASPAP45381 313 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 PTP4A2Q12974 167 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 MESDQ14696 234 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 CLUL1Q15846 466 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 CCL14Q16627 93 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 NAA35Q5VZE5 725 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 TLK2Q86UE8 772 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 C1orf127Q8N9H9 656 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 CPA5Q8WXQ8 436 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 PPP1R16BQ96T49 567 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 BCO2Q9BYV7 579 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 CISHQ9NSE2 258 aa13.1□□□□□ -0.31
CLIP4-203ENST00000401617 GPR32O75388 356 aa13.09□□□□□ -0.31
CLIP4-203ENST00000401617 NFICP08651 508 aa13.09□□□□□ -0.31
CLIP4-203ENST00000401617 CYP2C19P33261 490 aa13.09□□□□□ -0.31
CLIP4-203ENST00000401617 CTNNA1P35221 906 aaKnown RBP13.09□□□□□ -0.31
CLIP4-203ENST00000401617 NSFP46459 744 aaKnown RBP13.09□□□□□ -0.31
CLIP4-203ENST00000401617 MRPS25P82663 173 aaKnown RBP13.09□□□□□ -0.31
CLIP4-203ENST00000401617 ZNF699Q32M78 642 aa13.09□□□□□ -0.31
CLIP4-203ENST00000401617 JADE1Q6IE81 842 aa13.09□□□□□ -0.31
CLIP4-203ENST00000401617 UBL4BQ8N7F7 174 aa13.09□□□□□ -0.31
CLIP4-203ENST00000401617 SOCS4Q8WXH5 440 aa13.09□□□□□ -0.31
CLIP4-203ENST00000401617 KRT35Q92764 455 aa13.09□□□□□ -0.31
CLIP4-203ENST00000401617 RNPC3Q96LT9 517 aaKnown RBP13.09□□□□□ -0.31
CLIP4-203ENST00000401617 APBA2Q99767 749 aa13.09□□□□□ -0.31
CLIP4-203ENST00000401617 PCDHA3Q9Y5H8 950 aa13.09□□□□□ -0.31
CLIP4-203ENST00000401617 MROH7Q68CQ1 1323 aa13.09□□□□□ -0.31
CLIP4-203ENST00000401617 RAD51CO43502 376 aa13.08□□□□□ -0.31
CLIP4-203ENST00000401617 FGGP02679 453 aa13.08□□□□□ -0.31
CLIP4-203ENST00000401617 RRM1P23921 792 aa13.08□□□□□ -0.31
CLIP4-203ENST00000401617 C1QBPQ07021 282 aaKnown RBP13.08□□□□□ -0.31
CLIP4-203ENST00000401617 PCBP1Q15365 356 aaKnown RBP eCLIP13.08□□□□□ -0.31
CLIP4-203ENST00000401617 NT5DC4Q86YG4 428 aa13.08□□□□□ -0.31
CLIP4-203ENST00000401617 IFT20Q8IY31 132 aa13.08□□□□□ -0.31
CLIP4-203ENST00000401617 EIF1ADQ8N9N8 165 aaKnown RBP13.08□□□□□ -0.31
CLIP4-203ENST00000401617 NAP1L3Q99457 506 aaPredicted RBP13.08□□□□□ -0.31
CLIP4-203ENST00000401617 SLITRK6Q9H5Y7 841 aa13.08□□□□□ -0.31
CLIP4-203ENST00000401617 ZFYVE28Q9HCC9 887 aa13.08□□□□□ -0.31
CLIP4-203ENST00000401617 PDCD11Q14690 1871 aaKnown RBP13.08□□□□□ -0.32
CLIP4-203ENST00000401617 CCDC66A2RUB6 948 aa13.08□□□□□ -0.32
CLIP4-203ENST00000401617 KRIT1O00522 736 aa13.08□□□□□ -0.32
CLIP4-203ENST00000401617 SART1O43290 800 aaKnown RBP13.08□□□□□ -0.32
CLIP4-203ENST00000401617 THAP12O43422 761 aa13.08□□□□□ -0.32
CLIP4-203ENST00000401617 HEXIM1O94992 359 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms