RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 MIF4GDA9UHW6 222 aaKnown RBP18.11■□□□□ 0.49
PTPRA-205ENST00000399903 E7ENQ6 273 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 ZBED4O75132 1171 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 TJP3O95049 919 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 HSPA6P17066 643 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 CCNFP41002 786 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.11■□□□□ 0.49
PTPRA-205ENST00000399903 HOMEZQ8IX15 550 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 SLC30A5Q8TAD4 765 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 C7orf43Q8WVR3 580 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 MIPEPQ99797 713 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 CADM1Q9BY67 442 aaKnown RBP18.11■□□□□ 0.49
PTPRA-205ENST00000399903 KDM3AQ9Y4C1 1321 aa18.11■□□□□ 0.49
PTPRA-205ENST00000399903 CTNNA2P26232 953 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 CLK2P49760 499 aaKnown RBP18.1■□□□□ 0.49
PTPRA-205ENST00000399903 PKN2Q16513 984 aaKnown RBP18.1■□□□□ 0.49
PTPRA-205ENST00000399903 FYB2Q5VWT5 728 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 RHOT2Q8IXI1 618 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 FAM161BQ96MY7 647 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 SMC6Q96SB8 1091 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 NUP85Q9BW27 656 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 INTS2Q9H0H0 1204 aaKnown RBP18.1■□□□□ 0.49
PTPRA-205ENST00000399903 FAM86B1E9PN63 330 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 EXOC3O60645 756 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 PFDN1O60925 122 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 FAM86B2P0C5J1 330 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 FMO5P49326 533 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 GPC5P78333 572 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 PPP2R5CQ13362 524 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 DYNC1I2Q13409 638 aaKnown RBP18.1■□□□□ 0.49
PTPRA-205ENST00000399903 GIT2Q14161 759 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 C2CD6Q53TS8 623 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 TNFAIP8L3Q5GJ75 292 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 FBXO11Q86XK2 927 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 WDR60Q8WVS4 1066 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 ZNF653Q96CK0 615 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 SNF8Q96H20 258 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 IDI2Q9BXS1 227 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 PCIF1Q9H4Z3 704 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 SAYSD1Q9NPB0 183 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 NCANO14594 1321 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 MAGEA13PA6NCF6 341 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 BMP3P12645 472 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 DPEP1P16444 411 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 YARSP54577 528 aaKnown RBP18.1■□□□□ 0.49
PTPRA-205ENST00000399903 ARHGAP4P98171 946 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 STYK1Q6J9G0 422 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 TMEM179Q6ZVK1 233 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 CFAP61Q8NHU2 1237 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 INPP5DQ92835 1189 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 USP20Q9Y2K6 914 aa18.1■□□□□ 0.49
PTPRA-205ENST00000399903 ZNF76P36508 570 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 SYDE2Q5VT97 1194 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 CYFIP1Q7L576 1253 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 SLC5A5Q92911 643 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 PREBQ9HCU5 417 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 FBXO6Q9NRD1 293 aaPredicted RBP18.09■□□□□ 0.49
PTPRA-205ENST00000399903 HEY2Q9UBP5 337 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 PCDHA3Q9Y5H8 950 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 ZBTB39O15060 712 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 FAM13AO94988 1023 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 GAS8O95995 478 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 NT5C2P49902 561 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 MYL7Q01449 175 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 CC2D2BQ6DHV5 1058 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 CATSPER3Q86XQ3 398 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 SLC25A41Q8N5S1 370 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 ZNF564Q8TBZ8 553 aaPredicted RBP18.09■□□□□ 0.49
PTPRA-205ENST00000399903 ZFAND2BQ8WV99 257 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 OPTNQ96CV9 577 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 TYW1Q9NV66 732 aaKnown RBP18.09■□□□□ 0.49
PTPRA-205ENST00000399903 ARL8BQ9NVJ2 186 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 ARMCX1Q9P291 453 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 SERPINA10Q9UK55 444 aa18.09■□□□□ 0.49
PTPRA-205ENST00000399903 ASTN1O14525 1302 aa18.08■□□□□ 0.49
PTPRA-205ENST00000399903 MYO3BQ8WXR4 1341 aa18.08■□□□□ 0.49
PTPRA-205ENST00000399903 HAUS5O94927 633 aa18.08■□□□□ 0.49
PTPRA-205ENST00000399903 LMNAP02545 664 aaKnown RBP18.08■□□□□ 0.49
PTPRA-205ENST00000399903 PSMC2P35998 433 aaKnown RBP18.08■□□□□ 0.49
PTPRA-205ENST00000399903 DLGAP5Q15398 846 aa18.08■□□□□ 0.49
PTPRA-205ENST00000399903 SLC1A5Q15758 541 aa18.08■□□□□ 0.49
PTPRA-205ENST00000399903 LVRNQ6Q4G3 990 aa18.08■□□□□ 0.49
PTPRA-205ENST00000399903 KAT5Q92993 513 aa18.08■□□□□ 0.49
PTPRA-205ENST00000399903 PRR11Q96HE9 360 aaPredicted RBP18.08■□□□□ 0.49
PTPRA-205ENST00000399903 AMNQ9BXJ7 453 aa18.08■□□□□ 0.49
PTPRA-205ENST00000399903 NYAP2Q9P242 653 aa18.08■□□□□ 0.49
PTPRA-205ENST00000399903 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.08■□□□□ 0.48
PTPRA-205ENST00000399903 CALCAP01258 141 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 PLS3P13797 630 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 SLC34A1Q06495 639 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 IZUMO2Q6UXV1 221 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 CEP128Q6ZU80 1094 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 OTOAQ7RTW8 1153 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 ABTB1Q969K4 478 aaPredicted RBP18.08■□□□□ 0.48
PTPRA-205ENST00000399903 FAM136AQ96C01 138 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 PRR12Q9ULL5 1215 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 FZD1Q9UP38 647 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 GOLGA8SH3BPF8 625 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 GOLGA8MH3BSY2 632 aa18.08■□□□□ 0.48
PTPRA-205ENST00000399903 PDXKO00764 312 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms