RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 TARBP1Q13395 1621 aaKnown RBP11.81□□□□□ -0.52
LAMA3-203ENST00000399516 UBA6A0AVT1 1052 aaPredicted RBP11.81□□□□□ -0.52
LAMA3-203ENST00000399516 SLC26A4O43511 780 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 EFCAB14O75071 495 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 TPI1P60174 286 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 PLOD1Q02809 727 aaPredicted RBP11.81□□□□□ -0.52
LAMA3-203ENST00000399516 RFWD2Q8NHY2 731 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 CCSER1Q9C0I3 900 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 VCPKMTQ9H867 229 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 FAM217BQ9NTX9 383 aaPredicted RBP11.81□□□□□ -0.52
LAMA3-203ENST00000399516 RHBDL2Q9NX52 303 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 ACTR2P61160 394 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 ELMO2Q96JJ3 720 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 C9orf72Q96LT7 481 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 MRGBPQ9NV56 204 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 SRP68Q9UHB9 627 aaKnown RBP11.81□□□□□ -0.52
LAMA3-203ENST00000399516 CHMP2BQ9UQN3 213 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 PRR23D1E9PI22 279 aaPredicted RBP11.81□□□□□ -0.52
LAMA3-203ENST00000399516 PRR23D2P0DMB1 279 aaPredicted RBP11.81□□□□□ -0.52
LAMA3-203ENST00000399516 YWHABP31946 246 aaKnown RBP11.81□□□□□ -0.52
LAMA3-203ENST00000399516 PLA2G4AP47712 749 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 TWF2Q6IBS0 349 aaKnown RBP11.81□□□□□ -0.52
LAMA3-203ENST00000399516 CDY2AQ9Y6F7 541 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 CDY1Q9Y6F8 540 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 ZC3H13Q5T200 1668 aaKnown RBP11.81□□□□□ -0.52
LAMA3-203ENST00000399516 FAM162AQ96A26 154 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 TRIM62Q9BVG3 475 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 FAM95CA0A1B0GW59 222 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 DEFA1P59665 94 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 DEFA3P59666 94 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 ZNF235Q14590 738 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 NDFIP2Q9NV92 336 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 SERPINB1P30740 379 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 COPAP53621 1224 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 ANO4Q32M45 955 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 EDRF1Q3B7T1 1238 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 FAM196AQ6ZSG2 479 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 SCN4BQ8IWT1 228 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 CLEC4FQ8N1N0 589 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 REEP2Q9BRK0 252 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 FHOD1Q9Y613 1164 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 NMT1P30419 496 aaKnown RBP11.81□□□□□ -0.52
LAMA3-203ENST00000399516 GEMIN4P57678 1058 aaKnown RBP11.81□□□□□ -0.52
LAMA3-203ENST00000399516 CLEC4GQ6UXB4 293 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 ATPAF2Q8N5M1 289 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 B4GALNT2Q8NHY0 566 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 SYN2Q92777 582 aaPredicted RBP11.81□□□□□ -0.52
LAMA3-203ENST00000399516 KCND2Q9NZV8 630 aa11.81□□□□□ -0.52
LAMA3-203ENST00000399516 MAGEA4P43358 317 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 CELF4Q9BZC1 486 aaKnown RBP11.8□□□□□ -0.52
LAMA3-203ENST00000399516 RAVER2Q9HCJ3 691 aaKnown RBP11.8□□□□□ -0.52
LAMA3-203ENST00000399516 ARHGEF38Q9NXL2 777 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 FBXO40Q9UH90 709 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 ITSN1Q15811 1721 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 B2RBV5 119 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 VCPP55072 806 aaKnown RBP11.8□□□□□ -0.52
LAMA3-203ENST00000399516 TNIP2Q8NFZ5 429 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 CASKIN2Q8WXE0 1202 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 AP3B1O00203 1094 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 KIAA0391O15091 583 aaKnown RBP11.8□□□□□ -0.52
LAMA3-203ENST00000399516 PRPF4O43172 522 aaKnown RBP eCLIP11.8□□□□□ -0.52
LAMA3-203ENST00000399516 KPNB1Q14974 876 aaKnown RBP11.8□□□□□ -0.52
LAMA3-203ENST00000399516 RCN1Q15293 331 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 KYAT1Q16773 422 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 UGP2Q16851 508 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 ERP44Q9BS26 406 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 SWSAP1Q6NVH7 229 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 ARHGAP27Q6ZUM4 889 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 SRBD1Q8N5C6 995 aaKnown RBP11.8□□□□□ -0.52
LAMA3-203ENST00000399516 KRT75O95678 551 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 JPH1Q9HDC5 661 aaPredicted RBP11.8□□□□□ -0.52
LAMA3-203ENST00000399516 TCN1P20061 433 aaPredicted RBP11.8□□□□□ -0.52
LAMA3-203ENST00000399516 SNRNP35Q16560 246 aaKnown RBP11.8□□□□□ -0.52
LAMA3-203ENST00000399516 CYFIP1Q7L576 1253 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 PTPRN2Q92932 1015 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 DNAJC7Q99615 494 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 C17orf80Q9BSJ5 609 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 IL1RAPL1Q9NZN1 696 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 CHD1O14646 1710 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 SMAPO00193 183 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 ATP9BO43861 1147 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 DUOXA2Q1HG44 320 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 AASDHQ4L235 1098 aaPredicted RBP11.8□□□□□ -0.52
LAMA3-203ENST00000399516 CDR2LQ86X02 465 aaPredicted RBP11.8□□□□□ -0.52
LAMA3-203ENST00000399516 ASAP3Q8TDY4 903 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 GANCQ8TET4 914 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 CNBD2Q96M20 576 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 NSMCE4AQ9NXX6 385 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 COPG1Q9Y678 874 aaKnown RBP11.8□□□□□ -0.52
LAMA3-203ENST00000399516 TULP4Q9NRJ4 1543 aa11.8□□□□□ -0.52
LAMA3-203ENST00000399516 M0R3G1 203 aa11.79□□□□□ -0.52
LAMA3-203ENST00000399516 C6orf10Q5SRN2 563 aa11.79□□□□□ -0.52
LAMA3-203ENST00000399516 PRUNE1Q86TP1 453 aa11.79□□□□□ -0.52
LAMA3-203ENST00000399516 KRT35Q92764 455 aa11.79□□□□□ -0.52
LAMA3-203ENST00000399516 PRPF18Q99633 342 aaKnown RBP11.79□□□□□ -0.52
LAMA3-203ENST00000399516 DGKIO75912 1065 aa11.79□□□□□ -0.52
LAMA3-203ENST00000399516 NQO1P15559 274 aaKnown RBP11.79□□□□□ -0.52
LAMA3-203ENST00000399516 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
LAMA3-203ENST00000399516 PIGHQ14442 188 aaPredicted RBP11.79□□□□□ -0.52
LAMA3-203ENST00000399516 TRAPPC11Q7Z392 1133 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms