RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 RNPEPQ9H4A4 650 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 CAPN10Q9HC96 672 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 XPO7Q9UIA9 1087 aaKnown RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 V9GYQ6 96 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 RTN2O75298 545 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 ALOX15P16050 662 aaPredicted RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 CALML6Q8TD86 181 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 FHDC1Q9C0D6 1143 aaPredicted RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 SLAIN2Q9P270 581 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 ZMYM3Q14202 1370 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 USP17L5A8MUK1 530 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 POTECB2RU33 542 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 CAND2O75155 1236 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 ZNF579Q8NAF0 562 aaKnown RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 WNK4Q96J92 1243 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 APOL5Q9BWW9 433 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 PSMC3IPQ9P2W1 217 aaPredicted RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 INSRP06213 1382 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 MYOM2P54296 1465 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 RPAP1Q9BWH6 1393 aaPredicted RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 TSC22D2O75157 780 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 ZNF200P98182 395 aaPredicted RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 CNTN1Q12860 1018 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 PPP1R18Q6NYC8 613 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 SETD3Q86TU7 594 aaPredicted RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 RUBCNQ92622 972 aa12.18□□□□□ -0.46
HLCS-202ENST00000399120 RNPC3Q96LT9 517 aaKnown RBP12.18□□□□□ -0.46
HLCS-202ENST00000399120 UHRF1BP1Q6BDS2 1440 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 EMSYQ7Z589 1322 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 HMBSP08397 361 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 SH3BP5LQ7L8J4 393 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 AGPAT1Q99943 283 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 TSEN34Q9BSV6 310 aaKnown RBP12.17□□□□□ -0.46
HLCS-202ENST00000399120 KLHL11Q9NVR0 708 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 MLH3Q9UHC1 1453 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 GPATCH8Q9UKJ3 1502 aaKnown RBP12.17□□□□□ -0.46
HLCS-202ENST00000399120 H2AFYO75367 372 aaKnown RBP12.17□□□□□ -0.46
HLCS-202ENST00000399120 ANXA11P50995 505 aaKnown RBP12.17□□□□□ -0.46
HLCS-202ENST00000399120 PSMC5P62195 406 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 BTKQ06187 659 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 SNX17Q15036 470 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 PCSK7Q16549 785 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 SDE2Q6IQ49 451 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 TTC33Q6PID6 262 aaPredicted RBP12.17□□□□□ -0.46
HLCS-202ENST00000399120 LBHD1Q9BQE6 289 aaPredicted RBP12.17□□□□□ -0.46
HLCS-202ENST00000399120 EPN3Q9H201 632 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 USP15Q9Y4E8 981 aaPredicted RBP12.17□□□□□ -0.46
HLCS-202ENST00000399120 ZHX2Q9Y6X8 837 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 TRIM13O60858 407 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 SCP2P22307 547 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 RPS7P62081 194 aaKnown RBP12.17□□□□□ -0.46
HLCS-202ENST00000399120 MFSD4BQ5TF39 518 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 UNC5CLQ8IV45 518 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 ARHGEF26Q96DR7 871 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 MRPL48Q96GC5 212 aaKnown RBP12.17□□□□□ -0.46
HLCS-202ENST00000399120 VMP1Q96GC9 406 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 ECSITQ9BQ95 431 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 RAB6BQ9NRW1 208 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 RNF146Q9NTX7 359 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 AMACRQ9UHK6 382 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 PRIM2P49643 509 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 BYSLQ13895 437 aaKnown RBP12.17□□□□□ -0.46
HLCS-202ENST00000399120 ARID5BQ14865 1188 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 ANKS6Q68DC2 871 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 TRIM65Q6PJ69 517 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 MTO1Q9Y2Z2 717 aaKnown RBP12.17□□□□□ -0.46
HLCS-202ENST00000399120 ENO4A6NNW6 628 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 CHN1P15882 459 aa12.17□□□□□ -0.46
HLCS-202ENST00000399120 SPRP35270 261 aaPredicted RBP12.17□□□□□ -0.46
HLCS-202ENST00000399120 MDH1P40925 334 aaKnown RBP12.17□□□□□ -0.46
HLCS-202ENST00000399120 PABPC5Q96DU9 382 aaKnown RBP12.17□□□□□ -0.46
HLCS-202ENST00000399120 TNPO2O14787 897 aaKnown RBP12.16□□□□□ -0.46
HLCS-202ENST00000399120 CUL4AQ13619 759 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 PFKFB3Q16875 520 aaPredicted RBP12.16□□□□□ -0.46
HLCS-202ENST00000399120 CYFIP1Q7L576 1253 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 DNAJC9Q8WXX5 260 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 C18orf8Q96DM3 657 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 MED15Q96RN5 788 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 DGKIO75912 1065 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 SLC44A4Q53GD3 710 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 RCSD1Q6JBY9 416 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 TRIM48Q8IWZ4 208 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 DDHD1Q8NEL9 900 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 SCFD2Q8WU76 684 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.16□□□□□ -0.46
HLCS-202ENST00000399120 KLHL18O94889 574 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 IRF1P10914 325 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 CYP2C19P33261 490 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 HSPA13P48723 471 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 TWF1Q12792 350 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 ARMCX4Q5H9R4 360 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 ZNF473Q8WTR7 871 aaKnown RBP12.16□□□□□ -0.46
HLCS-202ENST00000399120 SPRTNQ9H040 489 aaPredicted RBP12.16□□□□□ -0.46
HLCS-202ENST00000399120 EEF2KO00418 725 aaKnown RBP12.16□□□□□ -0.46
HLCS-202ENST00000399120 TADA2AO75478 443 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 UBTFL6P0CB48 400 aaPredicted RBP12.16□□□□□ -0.46
HLCS-202ENST00000399120 RRM2P31350 389 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 STAG2Q8N3U4 1231 aa12.16□□□□□ -0.46
HLCS-202ENST00000399120 MARCH10Q8NA82 808 aaPredicted RBP12.16□□□□□ -0.46
HLCS-202ENST00000399120 SH3RF3Q8TEJ3 882 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms